Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3921 ATGTCGTTTTTCTTCCCATTCCATTTTCTTGCACACAAAGCAACTATTTTTCTTACTTTTTTCATCAATGTGAAACCAGTTTTCTTGCATGGCTTATCTGGTTTCCTCAATCTACTTCTGTTAGTGGCCTTATTAGTGTCATGGTTGTGGAAGAAACTTGCTGCTATAGAATCCAGAAAGAGAATACAAAAGACCCTTTTCACAAGGACACTTTTTTGTTCTTTTTCTGCTTTCAATCTTCTGCTTTGTTTCTTTGATTACTTCAGTTGGTATAGAAATGGTTTTTCTAAAGAAAAACTTGTGACCCTTTTAGATTTGGCTCTCAAAACCATTGCTTGGGGTGGTTTTTGTGTTTGTCTTGAAAGGACACTCATCTGTTCATTGTTCTTCAGAACTTGGTGTCTTTTTGACCTCTTTGTTTCATGTTGTTGCTTTACATTGGACATTGTTCTTCATGAAAAGCAAGCTCTTTTGCCAATTCCATACTTGGTTTCTGATGGTTTTTCTGTTTGTGTGGGGTTACTTATCTGTTGCTTATGTTTTCTTGTGAAAAATGAGGATGGAATAAAAGATAGAACTCTTCAAGAACCTCTTTTGAATGGCGATACAAAAGAAGCCAAAGGGTTTGACACTGTTACTCCATACTCAAATGCTGGTTTTTTCAGTATTCTTACATTCTCTTGGATTTTTCCACTGATTGTTGTAGGAAAGAACAAAACTTTAGACCTTGAAGATGTTCCTCAACTCGACAGAAGAGATAACTTATTTGGCGCTTTTCCGAATTTCAAGAATAAGCTTGAAGCATATTGTAGTGGTAATACTAATGACATCAACAAAGTGACCACATTTAAGCTAGTAAAGTCATTAGCATTCACATCTTGGAAAGAGATTCTTTTGACAGCTATTTTTGCATTTGTAAACACATTGGCTTCTTATGTAGGTCCTTATCTTATAAATGATTTTGTTCAATATCTTAATGGACAAAGAAAATTTGAAAATGAAGGACTTGTTTTGGTGTCTGCATTTTTTGTAGCAAAGCTTCTTGAGTGTATAACAAAGAGACAATGGTTTTTCAGGTTGCAGCAAGTTGGAATTAGAATCCAAGCACTTCTTGTAACAATCATCTATAATAAAACTTTGACACTTTCATCTCAATCAAAGCAAGGCCACACTAGCTGCAAAATAATCAATTTCATGACTGTTGATGCAGAAAGAGTTGGCGACTTCAGTTACCATTTGCATGATCTTTGGTTGGTAGTTCTACAAATTTTAGTAGCTTTGTTTGTTTTGTATAAAAATCTCGGACTCGCATCGATTTCCGGGTTTGTTGCAACTATCATTGTAATGTTGGCAAATGTTCCTTTAGGATCAATCCAAGAGAAGTTTCAAGGCAAGTTGATGGTGTCAAGAGACAAAAGAATGAAGGCCACATCAGAGATTTTAAGGAACATGAGGATTCTTAAACTACAAGGATGGGAAATGAAGTTTCTGTCTAAGATAACTGAGCTCAGAAAGAATGAAGAATTCTGGTTAAAGAAACTTTTATACACTTTATCTGTGATCATATTTGTATTTTGGAGTGCACCGGCATTTGTGTCTGTGGTTACTTTTGGTACTTGTTTGCTTATAGGGGTACCACTTGAATCAGGAAAGATCTTATCTTCACTTGCAACATTTCAGATTCTACAAGAACCAATTTATAACCTTCCCGAAACGATTTCAATGATGGCACAGGCTAAGGTTTCTCTCGACAGGATTGCATCTTTTCTTTGTCAAGATGACATGAAGTCTGATATTGTTGAGAAGCTTCCAAAGGGTAGTACTAGTAATAGTTCTGATATAGCAATTGAAGTAGTTGATGGAAATTTCTCTTGGGATTTACCTTTTTCAAATTTAGTATTGAAAAACATAAATCTTAAGATTTTTCACGGAACGAAAGTTGCTATTTGTGGTACTGTTGGATCAGGTAAATCTACTTTACTTTCATGTATATTAGGAGAAGTACCAAAAATATCAGGGGTAGTAAAGGTTTGTGGAATAAAGGCCTATGTAGCTCAGTCACCATGGATACAAAGTAGCAAGATAGAGGATAATATATTGTTTGGGAAGGATATGGAAAGGGAAAGATATGAGAAGGTTCTTGAAGCATGCTCACTAAAGAAGGATCTTGAGATTTTGTCATTTGGAGATCAAACAATGATAGGGGAGAGGGGAATAAATTTGAGTGGTGGACAGAAACAACGGATACAGATTGCCCGTGCTTTGTATCAAGACGCTGATATATATCTATTCGATGATCCGTTTAGTGCTTTGGATGCTCATACCGGAACTCATCTATTTAAGGAATGCTTGTTGGGATTTTTAAGTTCAAAGACTGTGATTTATGTCACGCATCAAGTCGAGTTCTTACCTGCTGCTGACCTTATCTTGGTTATGAAAGATGGAGAAATAACTCAATGTGGAAAGTACAATGATCTACTCAACTCAGGCACTGATTTTATGAAACTAGTTGGTGCTCATAGAGAAGCTTTGTCTGCACTTGATTCATCAAATGGAGATACAACAATATCTGATAAAATAAGTACATCACAAGATTCTCTAGGTATCGCTCTTTCACACGAAGTCGACAAAATAGTACAGAATGCTGAAATAGATGACAAGTTTGAGGCAAAAGGCCAGATTGTTCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTGTATTGGAAATATATCACAATAGCATATGGAGGAGCTCTTATACCATTCATATTGATAGCTGAAATCATGTTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTCATCAACTCCTATTTCAAAAGATGTGAAGCCAACTGTTGGAGGAAGTAAACTCCTAGTTGTCTATGCAGCTTTGTCCATAGGAAGTTCTTTATGTGTCCTAGCTAGAGCAATACTTGTTGTCACAGCTGGTTATAAGACTGCTACTCTACTCTTCACTAAAATGCATCTTTGCATTTTCCATGCTCCAATGTCATTTTTTGATGCCACTCCAAGTGGAAGAATCCTTAATAGGGCTTCTACTGACCAAAGTGCAGTGGATATAAACATTCCTTTTCAAACTGCATTAGTTGCTTGTTCTGTGATCCATCTTCTTGGAATTATAGCGGTGATGTGTCAAGTTGCATGGCAAGTTATCATTGTCTTTGTTCCTATGACAGCAATCTGCATTTGGTATCAGAAATATTATATACCATCAGGCCGCGAACTATCTCGTTTAGTCGGAGTATGCAAAGCTCCTGTCATCCAACACTTTGCTGAAACAATTTCAGGTACATCAACTATCAGAAGCTTTGATCAGGTATCAAGATTTGAAGAAACAAATATGAAATTAACAGATGGATATTCACGCCCCAAATTCAATATTGCTGGTGCTATGGAATGGTTGTGTTTTCGATTAGACATGGTGTCATCTATCACATTTGCCTTTTGCTTGGTAGTCCTGATAGCGGTTCCACAAGGAGTCATAAATTCAGATGTTGCTGGTTTAGCCGTGACATATGGCCTTAATCTGAACATTATACAAGCATGGATGATATGGGAACTTAGCAACTTAGAGACCAAAATTATATCAGTAGAAAGAATACTTCAATATACTTCTATTCCTAGTGAGCCTCCTCTTGTTGTCGAGGAAAACCGGCCACAAGCTTCTTGGCCATTATATGGCACAATTGATATTCACAACTTGCAGGTGCGTTATGCTCCACATATGCCGCTAGTTTTACGTGGCCTTACATGCACATTTGATGGAGGACTGAAAACTGGAATTGTTGGAAGAACTGGAAGTGGTAAATCAACTCTCATACAAGCTCTATTTCGAATAGTTGAGCCTTCTTTTGGGACAATTATGATTGATGGTATCAACATATCTTCCATTGGACTTCATGATTTGAGGTCAAAACTGAGTATTATTCCTCAGGATCCAACCATGTTTGAAGGGAATGTGAGGAGTAATTTGGATCCATTGGAAGAGTACACAGATGAACAAATTTGGGAGGCACTAGATAAATGTCAACTTGGAGACGAAGTTAGAAGGAAAGACGGAAGGTTAGACTCGGCAGTGAGCGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGTCTTAGTAGAGTGCTGCTCAAGAAAAGTAAAGTCTTGGTACTAGATGAAGCTACTGCATCAGTCGACACGGCTACCGATACTTTTATACAGCAAACTCTTAAGCAACATTTCTCTGATTGCACAGTAATTACAATTGCACATAGAATAACTTCTGTTATTGACAGTGATATGGTTCTACTACTTAATCAAGGACTAATTGAGGAGTATGATTCTCCAACAAGATTGCTAGAGAACAAGTTGTCATCTTTTGCTCAACTTGTTGCTGAGTATACCACAAGGTCCAACTTCAGTTTTCATCCACAAAAATAG 4473 0.3711 MSFFFPFHFLAHKATIFLTFFINVKPVFLHGLSGFLNLLLLVALLVSWLWKKLAAIESRKRIQKTLFTRTLFCSFSAFNLLLCFFDYFSWYRNGFSKEKLVTLLDLALKTIAWGGFCVCLERTLICSLFFRTWCLFDLFVSCCCFTLDIVLHEKQALLPIPYLVSDGFSVCVGLLICCLCFLVKNEDGIKDRTLQEPLLNGDTKEAKGFDTVTPYSNAGFFSILTFSWIFPLIVVGKNKTLDLEDVPQLDRRDNLFGAFPNFKNKLEAYCSGNTNDINKVTTFKLVKSLAFTSWKEILLTAIFAFVNTLASYVGPYLINDFVQYLNGQRKFENEGLVLVSAFFVAKLLECITKRQWFFRLQQVGIRIQALLVTIIYNKTLTLSSQSKQGHTSCKIINFMTVDAERVGDFSYHLHDLWLVVLQILVALFVLYKNLGLASISGFVATIIVMLANVPLGSIQEKFQGKLMVSRDKRMKATSEILRNMRILKLQGWEMKFLSKITELRKNEEFWLKKLLYTLSVIIFVFWSAPAFVSVVTFGTCLLIGVPLESGKILSSLATFQILQEPIYNLPETISMMAQAKVSLDRIASFLCQDDMKSDIVEKLPKGSTSNSSDIAIEVVDGNFSWDLPFSNLVLKNINLKIFHGTKVAICGTVGSGKSTLLSCILGEVPKISGVVKVCGIKAYVAQSPWIQSSKIEDNILFGKDMERERYEKVLEACSLKKDLEILSFGDQTMIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSALDAHTGTHLFKECLLGFLSSKTVIYVTHQVEFLPAADLILVMKDGEITQCGKYNDLLNSGTDFMKLVGAHREALSALDSSNGDTTISDKISTSQDSLGIALSHEVDKIVQNAEIDDKFEAKGQIVQEEEREKGKVGFSVYWKYITIAYGGALIPFILIAEIMFQLLQIGSNYWMASSTPISKDVKPTVGGSKLLVVYAALSIGSSLCVLARAILVVTAGYKTATLLFTKMHLCIFHAPMSFFDATPSGRILNRASTDQSAVDINIPFQTALVACSVIHLLGIIAVMCQVAWQVIIVFVPMTAICIWYQKYYIPSGRELSRLVGVCKAPVIQHFAETISGTSTIRSFDQVSRFEETNMKLTDGYSRPKFNIAGAMEWLCFRLDMVSSITFAFCLVVLIAVPQGVINSDVAGLAVTYGLNLNIIQAWMIWELSNLETKIISVERILQYTSIPSEPPLVVEENRPQASWPLYGTIDIHNLQVRYAPHMPLVLRGLTCTFDGGLKTGIVGRTGSGKSTLIQALFRIVEPSFGTIMIDGINISSIGLHDLRSKLSIIPQDPTMFEGNVRSNLDPLEEYTDEQIWEALDKCQLGDEVRRKDGRLDSAVSENGENWSMGQRQLVCLSRVLLKKSKVLVLDEATASVDTATDTFIQQTLKQHFSDCTVITIAHRITSVIDSDMVLLLNQGLIEEYDSPTRLLENKLSSFAQLVAEYTTRSNFSFHPQK* 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3921 1490 SUPERFAMILY ABC transporter transmembrane region 286 586 IPR036640 GO:0005524|GO:0016021
Tpr3g3921 1490 Pfam ABC transporter 1260 1407 IPR003439 GO:0005524
Tpr3g3921 1490 Pfam ABC transporter 634 768 IPR003439 GO:0005524
Tpr3g3921 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 298 578 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3921 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 616 839 IPR003439 GO:0005524
Tpr3g3921 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1244 1476 IPR003439 GO:0005524
Tpr3g3921 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 925 1205 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3921 1490 Pfam ABC transporter transmembrane region 298 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3921 1490 Pfam ABC transporter transmembrane region 926 1165 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr3g3921 1490 Gene3D - 1225 1478 IPR027417 -
Tpr3g3921 1490 Gene3D - 590 861 IPR027417 -
Tpr3g3921 1490 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Tpr3g3921 1490 CDD ABCC_MRP_domain1 616 816 - -
Tpr3g3921 1490 CDD ABC_6TM_ABCC_D1 299 586 IPR044746 GO:0140359
Tpr3g3921 1490 CDD ABC_6TM_ABCC_D2 923 1217 IPR044726 GO:0140359
Tpr3g3921 1490 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 100 1490 - -
Tpr3g3921 1490 SMART AAA_5 643 816 IPR003593 -
Tpr3g3921 1490 SMART AAA_5 1268 1453 IPR003593 -
Tpr3g3921 1490 Gene3D ABC transporter type 1, transmembrane domain 885 1223 IPR036640 GO:0005524|GO:0016021
Tpr3g3921 1490 Gene3D ABC transporter type 1, transmembrane domain 273 589 IPR036640 GO:0005524|GO:0016021
Tpr3g3921 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1232 1467 IPR027417 -
Tpr3g3921 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 838 IPR027417 -
Tpr3g3921 1490 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 100 1490 - -
Tpr3g3921 1490 SUPERFAMILY ABC transporter transmembrane region 910 1223 IPR036640 GO:0005524|GO:0016021
Tpr3g3921 1490 CDD ABCC_MRP_domain2 1240 1460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3921 Tpr-Chr3 43699103 43707261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3921 594 868 Calmodulin-binding Proteins AT2G36910 29.667 3.32e-27 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3921 - K05666 gmx:100775358 2204.48