Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3909 ATGGATCTTCAAACAATTTACCCTTTCACCATTTTGTTCATTTTCGTCATCTCAATCATTGTAACGCTAAAACTAATGAAGAAAAACAAAAAAATTGACTCAATTCCAAATATACCCCCAGGGCCATGGAAGCTACCTATCATAGGAAACATAGCTAATCTTATTGGCTCTCCACCACATAGAAAATTAAGAGATTTAGCAAAAAAATATGGACCTTTAATGCATCTTCAACTTGGTGAACTCTTTGTTGTTGTTGTTTCCTCAGCAGAACATGCTAAGGAAATAATGAAAACACATGATGTTATATTTGCGTCGAGGCCTCATACACTAACCTCAGAGATAATCTTTTATGAATCAACAGATATAGTTTTTTCACCTTATGGCGAATATTGGAGACAACTTCGAAAGATTTGTACCGTTGAACTTTTAAGTATAAAACGTGTTCAATCTTTTCGGCCAATAAGGGAACAAGAGATGGGTAATCTCGTCAAAAATATTGCTTCCGATGAAGGAAGAGTAGTTAATCTTTCTCAACAAGTTGTATCAATGATGTTTTCAATCACTTCAAGGGCAGTATTTGGAAAAAAATACATTGAGCAAGATGAGTTCATAGCGCAAGTAAGAGAAGTTATGCAGCTATCTAGTGGTTTCTATATTGGAGACTTGTTTCCTTCGACAAAATGGCTTCAAAACTTTAGTGGAATGAGATCTAAGCTTGAGAAGGTGCATCAAAATATTGATAGAATACTTGAGATGATTATCAATGATCATAAAGAAACAAAGTCAAGAACTAAAGATTGTTTAGTTGAAGGAGAGGAAGATTTGATTGATATTCTCTTGAAATTTGAAGAAGGTAGCAGCTGCAATCAGGAACTTTCATTAACTAAAAGAAATATCAAGGCTATACTCTTTGATATCTTCACAGGTGGAAGTGACACAGCAGCAACTACAATAAACTGGACAATGGCTGAGATGATGAAGAATCCAAGAGTATTGAAGAAAGCACAAACTGAAGTGAGAATGATATTCGAAAAAACAGGAAAAATTGATGAAACATGCATTGATGAATTAAAATACTTAAAAGCAATTATCAAAGAGATTTTAAGAATTCACCCTCCAGTTCCTCTTTTAATTCCAAGGGAATGTGGACAAGCTTGTGAGATTGATGGATATCACATACCAATCAAAAGTAAGGTAATAATCAACGCTTGGGCGATTGGAACGGATCCAAAATATTGGACTGAGCCAGAGAGGTTTTATCCTGAGAGGTTTATTGATAGTTCTGTTGATTATAAAGGAACTAATTTTGAGTACATTCCGTTTGGTGCTGGAAGGAGAATTTGTCCGGGTATAAACTATGGTATGGCAAATGTGGAATTGACTCTTGCTTTGTTATTGTTTCATTTTGATTGGAAACTTCCTAATGGAATGAAAAGTGATGATTTAGATATGACTGAGCTGTTTGGAGCATCTGTTATAAGAAAGGATGACTTGTACTTGATTCCAATCAGTTATACTTCTTTGGAGTATAGTAGTGAATAG 1542 0.3463 MDLQTIYPFTILFIFVISIIVTLKLMKKNKKIDSIPNIPPGPWKLPIIGNIANLIGSPPHRKLRDLAKKYGPLMHLQLGELFVVVVSSAEHAKEIMKTHDVIFASRPHTLTSEIIFYESTDIVFSPYGEYWRQLRKICTVELLSIKRVQSFRPIREQEMGNLVKNIASDEGRVVNLSQQVVSMMFSITSRAVFGKKYIEQDEFIAQVREVMQLSSGFYIGDLFPSTKWLQNFSGMRSKLEKVHQNIDRILEMIINDHKETKSRTKDCLVEGEEDLIDILLKFEEGSSCNQELSLTKRNIKAILFDIFTGGSDTAATTINWTMAEMMKNPRVLKKAQTEVRMIFEKTGKIDETCIDELKYLKAIIKEILRIHPPVPLLIPRECGQACEIDGYHIPIKSKVIINAWAIGTDPKYWTEPERFYPERFIDSSVDYKGTNFEYIPFGAGRRICPGINYGMANVELTLALLLFHFDWKLPNGMKSDDLDMTELFGASVIRKDDLYLIPISYTSLEYSSE* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3909 513 Pfam Cytochrome P450 39 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 508 - -
Tpr3g3909 513 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Tpr3g3909 513 Gene3D Cytochrome P450 33 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3909 513 PANTHER CYTOCHROME P450 71B11-RELATED 9 508 - -
Tpr3g3909 513 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3909 Tpr-Chr3 43544375 43546492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3909 13 502 Cytochrome P450 AT3G26310 40.040 1.47e-135 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3909 - - mtr:MTR_3g058060 813.913