Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3904 ATGGCTCATAATATGTTTTTTGCCATGGCTCCATTAGTCCTCTATTTTACATATCTTCTCTCCTTTGTCCTCTTAACCCTTATGGTACAGAAGATAAGAAAGAAGAAAAGTTACTCAACTTATAACATACCACGAGGGCCTACAAAGCTACCCATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCCATCGGAAATTAAGAGACCTGGCCAAAAAATATGGACCCGTAATGCATCTTCAACTTGGAGAGGTTTCGACTATTGTCATTTCATCACCCGAGTGTGCTATGGAGGTGATGAAAACCCATGATATTCACTTTGCAACAAGGCCTAAAATCCTTGCTACAGAAATACTGTCTTACAATTCTACAAATATAGCTTTTGCTCCTTATGGTAATTATTGGAGACAGCTACGAAAAATTTGCACAATGGAGCTTTTAAGCCTAAAAAGGGTCAACTCATACCAACCAATTAGAGAAGAAGTGTTTTGCAATCTTGTCAAATGGATTGCTTCACAGAACGGATTGCAAATCAATCTCACCGAAGCTATACTTTCTTCAATATACACAATTGTTTCGAGGGCAGCCTTTGGCAATAAATGCAAAGACCAAGAAAAATTTATAACATTGGTAAAAGAAACAGTAAAGGTTGCAGCAGGTTTTGACTTGGGAGATTTGTTTCCCTCAGCTAAATGGCTACAGCATGTTACTGGTTTGAGGCCTAAGCTTGAGGGGTTTCAGAAACAAACTGATCAGATACTAGAAAACATCATCAATGAGCATAAAGAGGAAAAGTACACTAAAGCCAAACGTGATCAAGGTGAAGTAGAAGATCTGGTTGATGTTCTCTTAAATTATGAGGATGGTAGTGACCAGGACTTTTCCTTAACAAAAAACAATATTAAGGCTATAATCCTGGACATTTTTGGTGCTGGAGGTGAAACATCAGCAAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAAAATAATGAAGAAAGCACAAGCTGAGGTGAGAGGGCTTTTCTCAATGAAAGGAAGGGTAGATGAAAATTACATTAACGAACTCAATTATTTGAAATTGGTTGTCAAAGAAACCCTGAGGTTACACCCTCCAGTTCCTCTTTTGCTACCAAGAGAATGTGGTCAAGCATGCGAGATAAATGGTTATAAAATACCGATTAAGAGTAAGGTGATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAACTACTGGACTGAACCAGAAAGATTTTATCCAGAGAGATTCATTGATAGTGATATTGACTATAAAGCGAGTAATTTTGAGTACATTCCTTTTGGTGCCGGAAGAAGAATATGCCCAGGGAGCTCATTTGGGTTGAGAAATATTGAGTTGGCCCTTGCGTTGTTGTTGTATCATTTTGACTGGATGCTTCCAAGTGGAATCAGAAGTGAAAAGTTGGAAATGACAGAGGAATTTGGAGTCGCAGTGAGAAGAAAAGATGATCTTTTTTTGGTTCCTGTTGTTTATCATCCTTTGAATGTCACATGA 1545 0.3825 MAHNMFFAMAPLVLYFTYLLSFVLLTLMVQKIRKKKSYSTYNIPRGPTKLPIIGNIHNLLSSQPHRKLRDLAKKYGPVMHLQLGEVSTIVISSPECAMEVMKTHDIHFATRPKILATEILSYNSTNIAFAPYGNYWRQLRKICTMELLSLKRVNSYQPIREEVFCNLVKWIASQNGLQINLTEAILSSIYTIVSRAAFGNKCKDQEKFITLVKETVKVAAGFDLGDLFPSAKWLQHVTGLRPKLEGFQKQTDQILENIINEHKEEKYTKAKRDQGEVEDLVDVLLNYEDGSDQDFSLTKNNIKAIILDIFGAGGETSASTIDWAMVEMIRDPKIMKKAQAEVRGLFSMKGRVDENYINELNYLKLVVKETLRLHPPVPLLLPRECGQACEINGYKIPIKSKVIVNAWAIARDPNYWTEPERFYPERFIDSDIDYKASNFEYIPFGAGRRICPGSSFGLRNIELALALLLYHFDWMLPSGIRSEKLEMTEEFGVAVRRKDDLFLVPVVYHPLNVT* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3904 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Tpr3g3904 514 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PANTHER CYTOCHROME P450 71B11-RELATED 16 511 - -
Tpr3g3904 514 Gene3D Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 SUPERFAMILY Cytochrome P450 44 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 Pfam Cytochrome P450 44 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 16 511 - -
Tpr3g3904 514 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3904 514 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3904 Tpr-Chr3 43506030 43508134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3904 12 509 Cytochrome P450 AT1G13110 41.683 7.53e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3904 - - gmx:100778572 782.326