Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3903 ATGGCTTTACTAGTTTTCTACTTGCCATTACTTTTCTCCTTTGTTCTCTTAGCCCTTGTTGTACAAAAATTAAGAAAGAAGATCAAGAAAACTGACTCAACTTTTAACCTCCCTAAAGGGCCTAGAAAGCTACCTATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCCATCGAAAATTAAGAGACTTGGCCAAAAAATATGGACATGTAATGCATCTTCAACTTGGAGAGATTTCTACTATTGTCATATCATCACCTGAGTGTGCTAGGGAGGTGATGAAAACCCATGATATTCACTTTGCAACAAGGCCTCAAATCCTAGCTACAGAAATAATGTCTTACAATACCACAAATATCGCTTTCGCTCCTTATGGTAATTATTGGAGACAGTTACGAAAAATCTGCACATTGGAGCTTTTAAGCCAAAAAAGGGTAAACTCGTACCAACCAATTAGAGAAGAGGTGCTCTCCGATCTTGTCAAATGGATTGCTTCAGAGAATGGAATGCCAATAAACCTCACTGAAGCTGTACTTTCTACAATATACACAATTGTTTCAAGGGCCGCCATTGGGAATAAATGCAAAGACCAAGAAAAGTTTATATCAGTGGTAAAACAATCATTAAAGGTTGCAGCAGGTTTTGACTTGGGAGATTTGTATCCTTCTGCTAAATGGCTACAGCGTGTTACTGGTTTGAGGCCTAAGCTTGAGAGCTTTCATCGACAAATTGATCAGATATTAGAAAACATCATCAATGAGCATAAAGAGACAAAGGACACAAAAGCAAAAGCTGATCAAGGTGGTGTAGAAGAAGACCTTTTAGACGTTCTCTTAAAATACGAGGATGGTAGCAACCATGACTTTTCATTAACAAAAAACAATATCAAAGCCATACTCCTGGACATTTTCGGTGCCGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGTAGAAATGATAAGGGATCCTAGAACAATGAACAAAGCACAAGCTGAGGTGAGAGAGCTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTATCTCAACGAGCTCAGTTATTTGAAATCAGTTGTCAAAGAAACTCTGAGGTTACACCCTCCATTACCTCTTTTACTACCAAGAGAATGTGGTCAAACATGTGAGATAAATGGTTATCACATACCTATTAAGACTAAGGTGATAGTCAATGCTTGGGCAATTGCAAGAGATCCAACCTACTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGACAACCCTTTTGACTATAAAGGGAGTAATTTTGAGTACACTCCTTTTGGTGCTGGAAGAAGAATATGCCCGGGGAGCACATTTGGTTTGAGAAATATTGATCTGGTTCTTGCGATGTTGTTGTATCATTTTGACTGGAAGCTTCCAAGTGGAATCAGAAGTGAAGAATTGGATATGACTGAGGAATTTGGAGTCGCAGTTAGAAGAAAAGATAATCTTTTATTGCTTCCTTCTGTTTATCATCCTTTGCATGTCACATGA 1530 0.385 MALLVFYLPLLFSFVLLALVVQKLRKKIKKTDSTFNLPKGPRKLPIIGNIHNLLSSQPHRKLRDLAKKYGHVMHLQLGEISTIVISSPECAREVMKTHDIHFATRPQILATEIMSYNTTNIAFAPYGNYWRQLRKICTLELLSQKRVNSYQPIREEVLSDLVKWIASENGMPINLTEAVLSTIYTIVSRAAIGNKCKDQEKFISVVKQSLKVAAGFDLGDLYPSAKWLQRVTGLRPKLESFHRQIDQILENIINEHKETKDTKAKADQGGVEEDLLDVLLKYEDGSNHDFSLTKNNIKAILLDIFGAGGETSASTIDWAMVEMIRDPRTMNKAQAEVRELFKMKGRVDENYLNELSYLKSVVKETLRLHPPLPLLLPRECGQTCEINGYHIPIKTKVIVNAWAIARDPTYWTEPERFYPERFIDNPFDYKGSNFEYTPFGAGRRICPGSTFGLRNIDLVLAMLLYHFDWKLPSGIRSEELDMTEEFGVAVRRKDNLLLLPSVYHPLHVT* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3903 509 Pfam Cytochrome P450 38 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tpr3g3903 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 SUPERFAMILY Cytochrome P450 38 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 506 - -
Tpr3g3903 509 PANTHER CYTOCHROME P450 71B11-RELATED 8 506 - -
Tpr3g3903 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3903 509 Gene3D Cytochrome P450 27 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3903 Tpr-Chr3 43495481 43497601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3903 5 502 Cytochrome P450 AT3G26310 41.732 2.64e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3903 - - gmx:100778040 769.229