Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3902 ATGTTGCTCATACTATGCTTCTTTGCCATGGAACTAATAGTCTTCTACTTTGCATATTTTTTCTCCTTTGTCCTCTTAACCCTTGTGGTACAAAGGACAAGAAAGAAGAAAACTTGCTCGAATTATAACATACCACGAGGGCCTAGAAAGCTACCTATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCCATCGAAAATTAAGAGACTTGGCCAAAATATATGGACACGTAATGCATCTCCAACTTGGAGAGGTTTCTACCATTATTATTTCCTCAGCCAAGTGTGCTAGGGAGGTAATGAAAACCCATGATATTCACTTTGCAACAAGGCCTCAAATCCTAGCTACAGAAATAATGTCTTACAATTCCACAAATATCGCTTTTGCTCCTTATGGTAATTATTGGAGACAGTTACGAAAAATCTGCACATTGGAGCTTTTGAGCCTAAAAAGGGTAAACTCATACCAAACAATTAGAGAAGAGGTGTTCTCCAATCTTATCAAATGGATTGCTTCACAGAATGGAACACCAATCAACCTCACTGAAGCTGTACTTTCTACAATATACACAATTGTTTCGAGGGCCGCTATTGGGAATAAATGCAAAGACCAAGAAAAACTTATAGCAGTGGTAAAACAATCATTAAAGGTTGCAGCGGGTTTTGACTTGGGAGATTTGTATCCTTCTGCTAAATGGCTACAACGTGTTACTGGCTTGAGGCCTAAGCTTGAGAGGTTTCAACGACAAACTGATGAGATATTAGAGAACATCATCAATGAGCATAAAGAGGCAAAGTACACAAAAGCCAAAGCTGATCAAGGTGGAGTAGAAGATCTGCTAGATGTTCTCTTAAATTATGAGGATGGTAGTGACCAAGATTTTTCCTTAACAAAAAACAATATGAAGGCCGTAATCCTGGACATTTTTGGTGCAGGAGGTGAGACATCAGCAAGCACAATAGATTGGGCAATGGTAGAAATGATAAGGGATCCAAGAACAATGAAAAAAGCACAAGTTGAGGTGAGAGAGCTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTACCTCAACGAGCTCAGTTATTTGAAATCAGTTGTCAAAGAAACTCTGAGGTTACACCCTCCACTACCTCTTTTGCTACCAAGAGAATGTGGCCAAACATGTGAGGTAAATGGTTATCACATACCGATTAAGACTAAGGTGATAATTAATGCTTGGGCAATTGCAAGAGATCCAACCTACTGGACTGAACCAGAAAGGTTTTATCCAGAGAGATTCATTGACAACACTTTTGACTATAAAGGGAGTCATTTTGAGTACACTCCTTTTGGTGCTGGAAGAAGAATATGCCCGGGGAGCACATTTGGTTTGAGAAATATTGATCTGGTTCTTGCGATGTTATTGTATCATTTTGACTGGAAGCTTCCAAGTGGAATCAGAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCGCAGTGAGAAGAAAAGATAATCTTTTATTGCTTCCTTCTGTTTATCATCCTTTGAATGTTACACAAGAAGAAAATGAAACCTTTGGCAGTGTACTAGTATGTTCCGGTAAAAATATGTAG 1602 0.3858 MLLILCFFAMELIVFYFAYFFSFVLLTLVVQRTRKKKTCSNYNIPRGPRKLPIIGNIHNLLSSQPHRKLRDLAKIYGHVMHLQLGEVSTIIISSAKCAREVMKTHDIHFATRPQILATEIMSYNSTNIAFAPYGNYWRQLRKICTLELLSLKRVNSYQTIREEVFSNLIKWIASQNGTPINLTEAVLSTIYTIVSRAAIGNKCKDQEKLIAVVKQSLKVAAGFDLGDLYPSAKWLQRVTGLRPKLERFQRQTDEILENIINEHKEAKYTKAKADQGGVEDLLDVLLNYEDGSDQDFSLTKNNMKAVILDIFGAGGETSASTIDWAMVEMIRDPRTMKKAQVEVRELFKMKGRVDENYLNELSYLKSVVKETLRLHPPLPLLLPRECGQTCEVNGYHIPIKTKVIINAWAIARDPTYWTEPERFYPERFIDNTFDYKGSHFEYTPFGAGRRICPGSTFGLRNIDLVLAMLLYHFDWKLPSGIRSEELDMTEEFGVAVRRKDNLLLLPSVYHPLNVTQEENETFGSVLVCSGKNM* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3902 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Tpr3g3902 533 PANTHER CYTOCHROME P450 71B11-RELATED 16 512 - -
Tpr3g3902 533 Gene3D Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 16 512 - -
Tpr3g3902 533 SUPERFAMILY Cytochrome P450 45 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 Pfam Cytochrome P450 45 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3902 533 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3902 Tpr-Chr3 43489613 43491731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3902 23 508 Cytochrome P450 AT3G26310 41.165 2.97e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3902 - - gmx:100778040 758.444