Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3901 ATGGCTCTCTTAGTCCTCTACTTTGCATATCTTTTCTCCTTTGTCTTATTAACCCTTATGGTACAAAAGATAAGAAAGAAGAAAAGTTACTCAAATTTTAACTTACCACCAGGGCCTAGAAAGCTACCTATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCAATCGAAAATTAAGAGATTTGGCAAAAAAATATGGACCTGTGATGCATCTTCAACTTGGAGAGGTTTCTACTATTATCATTTCATCACCCGAGTGTGCTAGGGAGGTTATGAAAACTCATGATATACACTTTGCAACAAGGCCTCAAATCCTAGCTACAGAAATAATGACTTACAATAACACAAATATAGCTTTCTCTCCTTATGGTAATTACTGGAGACAGTTACGAAAAATATGCACATCGGAGCTTTTAAGCTTAAAAAGAGTAAACTCGTACCAACCAATTAGAGAAGAAGTGCTCTCCAATCTTGTCAAATGGATTGCTTCACAGAATGGATCGCCAATAAACCTCACTGAAGCTGTAATTTCTTCAATATACACAATTGTTTCAAGGGCAGCCTTTGGCAATAAATGTAACGAGCAAGAAAAATTTATAGCAGTTGTAAAACAATCAATAAAGGTTTCAGCAGGTTTTAACTTGGGAGATTTGTTTCCTTCTTCTAAATGGGTACAACATGTTACTGGTTTGAGGCCTAAGCTTGAGAGTTTTCATCGACAAACTGATCAGATATTTGAAAACATCATCAAGGCGCATAAAGTTGAAAAATACACAAAAGGCAAAGATGATCAAGGTGAAGTACAAGAAGATCTGGTAGATGTTCTCTTAAAATATGAGGATGGTAGCAACCAGGATTTTTCCTTAACAAAAGACAATATCAAAGCCATAATCATGGACATGTTTGGTGCTGGAAGTGAGACATCTACAAGCACAATAGATTGGGCAATGGTAGAAATGGTAAGGAATCCAAGAATAATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTGCATCAATGAAATTAATTATTTGAAATCAGTAGTAAAAGAAACTTTAAGGCTACACCCTCCAGCACCTCTTTTGTTACCAAGAGAATGCGGTCAAGCATGTGATATAAACGGTTATCACATTCCGATTAAGACTAAGGTGATAATTAATGCTTGGGCAATTGCAAGAGATCCAAACTACTGGACTGAACCAGAGAAGTTTTATCCAGAGAGATTCATTGACAGCACTATTGACTATAAAGGAAGTAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGACTATGCCCAGGGATCACATTTGGTTTGAGAAATATTGAGCTCGGCCTTGCAACGTTGTTGTATCATTTTGACTGGAAGCTTCCTAGTGGAATCAGAAGTGAAGAATTGGACATGACTGACGAATTTGGAGTCACAATGAGAAGAAAAGATGATCTTTTGTTGCTACCATTTTCTTATCATCCTTTGTCTGTTATGTGA 1524 0.3661 MALLVLYFAYLFSFVLLTLMVQKIRKKKSYSNFNLPPGPRKLPIIGNIHNLLSSQPNRKLRDLAKKYGPVMHLQLGEVSTIIISSPECAREVMKTHDIHFATRPQILATEIMTYNNTNIAFSPYGNYWRQLRKICTSELLSLKRVNSYQPIREEVLSNLVKWIASQNGSPINLTEAVISSIYTIVSRAAFGNKCNEQEKFIAVVKQSIKVSAGFNLGDLFPSSKWVQHVTGLRPKLESFHRQTDQIFENIIKAHKVEKYTKGKDDQGEVQEDLVDVLLKYEDGSNQDFSLTKDNIKAIIMDMFGAGSETSTSTIDWAMVEMVRNPRIMKKAQAEVREVFKMKGRVDENCINEINYLKSVVKETLRLHPPAPLLLPRECGQACDINGYHIPIKTKVIINAWAIARDPNYWTEPEKFYPERFIDSTIDYKGSNFEYIPFGAGRRLCPGITFGLRNIELGLATLLYHFDWKLPSGIRSEELDMTDEFGVTMRRKDDLLLLPFSYHPLSVM* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3901 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 504 - -
Tpr3g3901 507 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Tpr3g3901 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 Gene3D Cytochrome P450 28 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3901 507 PANTHER CYTOCHROME P450 71B11-RELATED 8 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3901 Tpr-Chr3 43486009 43488403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3901 6 498 Cytochrome P450 AT3G26310 41.434 1.55e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3901 - - gmx:100778040 777.319