Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3900 ATGACACAGTATACATCCTTCTTATCTATGTTTTCCATGGCTTTACTAGTCCTCTACTTGTCATTTCTTATCTCCTTTGTTCTCTTGGCCCTTGTTGTACAAAAAGTAGGAAAGAAGCTCAAGAAAACAGACTCAACATATAACCTCCCTAAAGGGCCTAGAAAGCTACCAATTATAGGAAATTTGCACAATCTGATTGGCTCTCCATTACATCAAAAACTAAGAGACTTAGCCAGAAAATATGGACCCTTAATGCATCTTCAACTTGGAGAGATTTCAACTATTGTCATTTCATCACCTTACTATGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTAAAGTCCTAGCTTCAGATTTAATTGCTTATAACTCCAAAGGTATAGTTTCTGCTCCTTATGGTAATTATTGGAGACAGTTAAGAAAAATTTGCACATTAGAGCTTTTGAGTCTAAAACGCGTCAACTCATACCGGCCAATTAGAGAAGAAGAACTCTCTAATCTTGTCAAATGGATTGCATCACAGAACGGTTCACCGATCAACCTTACTCAAGCTGTAATCTCTTCAGTATACACCATTGTTTCAAAATCTGCCTTCGGCAAGAAGTGCAAAGACCAAGAAAAGTTCATATCAGCATTGAAAGAATTATTTAAAATTGGAGGAGGTTTTGACTTAGCAGATTTGTTTCCTTCTATTACATGGCTGCATTATTTCACTGGTTTAAGGCCTAAACTTGAGAGGGTGCATCTACAGATTGATCAAATAATGGAAACCATTATCAATGAGCATAAAGAGGCCAAGTCAAAAGCAAAATTTAACCAAGGTGATGAACCAGATGAAGATTTGGTAGATGTTCTGATAAAATATGAAGACGGCAACAACAAGGAATTTATCTTATCTACAGACAATATCAAGGCCATAATCCTGGACATTTTTGGTGCTGGAGGTGAAACATCGGCAAACACCATAGATTGGGCAATGGTAGAAATGATAAGGAATCCAAGTATAATGAAGATAGCACAAGCTGAGGTGAGAGAGATTTTCAAAATGAAAGGAAGAGTTGATGAAAGTTGCATCAATGAACTCAATTATTTGAAATTAGTAGTCAAAGAAACCTTAAGGCTACACCCTCCAGTACCTCTTTTGTTACCAAGAGAATGTGGGCAAGCATGCGATATAAATGGTTATCACATACCGGTTAAGACTAAGGTAATAGTCAATGCTTTGGCGATTGCAACAGATCCAAACTACTGGACTGAACCAGAGAAGTTTTATCCGGAGAGATTCATTGATAGCACTGTTGACTATAAAGGAAATAATTTCGAGTACATTCCTTTTGGTGCTGGAAGAAGAATGTGTCCCGGTAGCATATTTGGTTTGAGAAGTGTTGAGTTGACTCTTGCAACGTTGTTGTATCATTTTGATTGGAAGCTTCCGAATGGAATGAAAAGTGAAGATTTGGACATGACTGAGGAATTTGGAGTCACAATGAGAAGAAAAAATGATCTTTTATTGTTCCCTTTTCCTGTCATGTGA 1551 0.372 MTQYTSFLSMFSMALLVLYLSFLISFVLLALVVQKVGKKLKKTDSTYNLPKGPRKLPIIGNLHNLIGSPLHQKLRDLARKYGPLMHLQLGEISTIVISSPYYAREVMKTHDINFAIRPKVLASDLIAYNSKGIVSAPYGNYWRQLRKICTLELLSLKRVNSYRPIREEELSNLVKWIASQNGSPINLTQAVISSVYTIVSKSAFGKKCKDQEKFISALKELFKIGGGFDLADLFPSITWLHYFTGLRPKLERVHLQIDQIMETIINEHKEAKSKAKFNQGDEPDEDLVDVLIKYEDGNNKEFILSTDNIKAIILDIFGAGGETSANTIDWAMVEMIRNPSIMKIAQAEVREIFKMKGRVDESCINELNYLKLVVKETLRLHPPVPLLLPRECGQACDINGYHIPVKTKVIVNALAIATDPNYWTEPEKFYPERFIDSTVDYKGNNFEYIPFGAGRRMCPGSIFGLRSVELTLATLLYHFDWKLPNGMKSEDLDMTEEFGVTMRRKNDLLLFPFPVM* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3900 516 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 Gene3D Cytochrome P450 42 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 Pfam Cytochrome P450 50 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PANTHER CYTOCHROME P450 71B11-RELATED 19 514 - -
Tpr3g3900 516 Coils Coil 515 516 - -
Tpr3g3900 516 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 SUPERFAMILY Cytochrome P450 50 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3900 516 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 19 514 - -
Tpr3g3900 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3900 Tpr-Chr3 43482036 43484447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3900 15 512 Cytochrome P450 AT3G26310 41.176 5.23e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3900 - - gmx:100778572 748.043