Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3864 ATGTCTCCGAACACGCTCCTGTTCTTCTTCTTCCTCTTACCAACAACACTCTCATCACAAAACACAACCTTCATCTTCTCATCTTTCACTCTCCGCAACATAACCCTCCTTGGCGACTCCTTCCTCCGCCACGGCATTGTCGGTCTAACTCGCTCCACCGCCGTCCCTGCTTCTAGCTCCGGCACTCTCCTTTACAACAACCCCATTTCTCATATACCCAATTCATCTTTCTCTTTCTCCACCAATTTCACTTTCTCTATCACTAACTCAAATCCTAACCCTCCTTCTTCTCCACTCAATGGCTTCTCCTTTTTCCTCAACTCCACTACTTCTTTCATTTCCCTCAATTTTCACACCAATAACAATAACCAAGTTGATTTTCATTTCAACAATACTTCAATCCAAAAAAACATTGATTTCAATTTCACAAATGGAAACTCGATAACTTCTTGGATCGACTATCAGGGTCCGTTTGATGGTCAGGATAAGAGACAGAACAATTTGATTGTTTACTTAAGCTATGAAAATTCGAGTTTTTCGAAGCCCGAAAACCCGGTGTTGAGTTTTGATGTTAATCTTTCTGAGTATTTTAAGGAGATTGAGCTTCTATATGTCGGGTTTTCGGGTTCTGCTGAAGGAAGTACTGAGCTTCAACAGATCATGAATTGGAGCTTTGAATCTTTTCAATTTCAAGTTTTGAATCAAACTCAAAATAAAAATTCAACCTTTCACCATGTTGGTTATCAATATGAGGATATTCCAGCTTCAAATTCAACAAGAAAAAGTCATGGAAAGAGATTCATGATTGGTTTTTGTGTTGCTATTGTGGGTCCTGCTTTTTTCTTTGTTCTGCTTTTGGTTTTAGGGTATGTTTCTTTTAGGAAATGGAGTAGTTTAAAGAAGCTTAAGAAGAGTGAAAGTTCTATAGGGTGTCCTAAAGAGTTTGGTTATAAGGAATTGAAGTTTGCTACAAAAGGGTTTCATAGTTCAAGGATAATTGGAAATGGTTCATTTGGGACAGTTTATAAGGCTTTGTTTGTTTCTTCTGGTACAGTTGCTGCTGTAAAAAGATCAAGACATTCACACGAAGGAAAAACCGAGTTTTTATCCGAGTTATCGATTATAGCTGGTTTAAGGCACAAGAATTTGGTTCAACTTTTAGGTTGGTGTGTTGAGAAAAGTGAATTGTTACTTGTATATGAGTTTATGGTGAATGGTAGTTTAGATAAGTTGCTTTATAAGGAATTTGAGTGTGGTGTTTTATTGAGTTGGATTCAAAGAGTTAACATTGTTGCTGGTTTGGCTTCTGTTTTAGCTTATTTGCATCAAGAATGTGAACAAAGAGTGATTCATCGAGATATTAAGACGGCGAATATATTACTAGATGGAAATTTGAATCCAAGATTAGGTGATTTTGGATTAGCAAAGCTTATGGATCATGATATGAGTCCGGTTTCGACGTTAACGGCCGGAACAATGGGATACCTAGCTCCTGAGTATCTTCAATACGGTAAAGCAACCGATAAAACCGATGTTTTTAGCTTTGGAGTCGTTGTTCTTGAAGTTGCTTGTGGTAGAAGGCCAATTGAGAAAGAGGGTCAAGAGATGGTTAATTTGGTTGATTTTGTTTGGGGACTTTATTCACAAGGAAAGTTAATTGAAGCTGTTGATAAGAGATTGAATGGCGAATTCGACGAAGATGAAATGAAGAAGATGTTGTTGTTAGGTTTGAGTTGTGCAAATCCAAATAGTGATGAAAGACCTTCTATGAGAAGAGTTTTGCAGATTCTTAACAATGAAGCTTTGCCTCTTGTTGTGCCTAAAGTGAAACCATGTCTTAGTTTCTCTTCTGGATTGTTATTGAGTTTTGATGAGATTGTTTCTGATTTTGATGAAAGGTTTAGTTCTAATCAATATAGTTGCAAGATACAAATTGAACCAAGTTGTTGA 1950 0.3718 MSPNTLLFFFFLLPTTLSSQNTTFIFSSFTLRNITLLGDSFLRHGIVGLTRSTAVPASSSGTLLYNNPISHIPNSSFSFSTNFTFSITNSNPNPPSSPLNGFSFFLNSTTSFISLNFHTNNNNQVDFHFNNTSIQKNIDFNFTNGNSITSWIDYQGPFDGQDKRQNNLIVYLSYENSSFSKPENPVLSFDVNLSEYFKEIELLYVGFSGSAEGSTELQQIMNWSFESFQFQVLNQTQNKNSTFHHVGYQYEDIPASNSTRKSHGKRFMIGFCVAIVGPAFFFVLLLVLGYVSFRKWSSLKKLKKSESSIGCPKEFGYKELKFATKGFHSSRIIGNGSFGTVYKALFVSSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKSELLLVYEFMVNGSLDKLLYKEFECGVLLSWIQRVNIVAGLASVLAYLHQECEQRVIHRDIKTANILLDGNLNPRLGDFGLAKLMDHDMSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSFGVVVLEVACGRRPIEKEGQEMVNLVDFVWGLYSQGKLIEAVDKRLNGEFDEDEMKKMLLLGLSCANPNSDERPSMRRVLQILNNEALPLVVPKVKPCLSFSSGLLLSFDEIVSDFDERFSSNQYSCKIQIEPSC* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3864 649 CDD STKc_IRAK 333 599 - -
Tpr3g3864 649 Gene3D - 19 228 - -
Tpr3g3864 649 Gene3D Transferase(Phosphotransferase) domain 1 403 603 - -
Tpr3g3864 649 ProSiteProfiles Protein kinase domain profile. 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3864 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Tpr3g3864 649 Pfam Legume lectin domain 121 235 IPR001220 GO:0030246
Tpr3g3864 649 Pfam Legume lectin domain 22 111 IPR001220 GO:0030246
Tpr3g3864 649 SMART serkin_6 327 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3864 649 PANTHER - 20 628 - -
Tpr3g3864 649 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3864 649 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Tpr3g3864 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 229 IPR013320 -
Tpr3g3864 649 SUPERFAMILY Protein kinase-like (PK-like) 311 622 IPR011009 -
Tpr3g3864 649 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.7-RELATED 20 628 - -
Tpr3g3864 649 Gene3D Phosphorylase Kinase; domain 1 291 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3864 Tpr-Chr3 43108472 43110951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3864 14 632 Receptor kinase-like Gene Family AT5G55830 53.662 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr3g3864 Pkinase 3.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3864 - - gmx:100808744 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3864 3 43108472 43110951 Tpr4g0226 4 2331707 2334106 PCT