Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3853 ATGTGGAAAACATTGTTTGAGATTGATACAAAGTATTGTCCAATCAAGCCTCTTGGCGAAGGAGCATATGGCGTGGTGTGCTCATTCGTCAATAAAGAGACAGATGAGAAAGTGGCAATTAAGAAGATTAGCAATGTGTTTGATCATTATGTTGATTCATTGAGAACTTTAAGGGAGCTGAAGCTGCTTAGACATGTTCGGCACGAGAATGTGATCACTTTGAAAGATGTTATGATTCCAGTCCAAAGAACAAATTTTAAGGATGTCTACTTGGTTTATGAACTCATGGATACAGATCTCCATAATATTATCAAGTCCTCTCAGCCACTTTCCAATGATCATTGCAAATTTTTCATGCTTCAGCTACTTGAAGGTCTTAACTATCTCCATTCTGCAAATATTCTTCACCGCGACTTGAAGCCTAGGAATCTGCTCGTCAATGCAAATTGTGATTTGAAGATATGTGACTTTGGGCTTGCTCGAACCAGTCAAGTTGATGGCGAGAGTATGACAGAGTATGTTGTCACACGTTGGTATCGTGCTCCAGAGCTTCTATTAGGATGTGACAATTATGGAACCTCCATCGATGTCTGGTCAGTAGGATGCATTTTTGCTGAAATTCTTGGTAGAAAGCCAATTTTCCCCGGAAAAGATTTTCTAGACCAAATTAAACTCATCGTAAATGTTCTTGGAAGCCAATATGAATCCGATCTTCAGTTTATCAATAATCCAAAAGCTAAGGGGTTTATCAAATCACTTCCCTATACAAAGGGGACACGGTTCTCTCGTCTATACCCAGAAGCAGACCCATTAGCTATAGATTTATTGGAAAAATTGCTTGTGTTTGATCCAGCAAGAAGAATAAATGTACTAGAAGCACTTCAACATCCGTATTTGGCTGAGCTTTATGATCCATGTAACCCTTCTTCTCAAGTTCAAGTCAATCTTGACATAGATGAAAATTGGGATGAACAAATGATCAGGGAAATGATGTGGAATGAAATGATACATTACCATCCTGAAGCTGCTTCTGACTTCACATAG 1044 0.3879 MWKTLFEIDTKYCPIKPLGEGAYGVVCSFVNKETDEKVAIKKISNVFDHYVDSLRTLRELKLLRHVRHENVITLKDVMIPVQRTNFKDVYLVYELMDTDLHNIIKSSQPLSNDHCKFFMLQLLEGLNYLHSANILHRDLKPRNLLVNANCDLKICDFGLARTSQVDGESMTEYVVTRWYRAPELLLGCDNYGTSIDVWSVGCIFAEILGRKPIFPGKDFLDQIKLIVNVLGSQYESDLQFINNPKAKGFIKSLPYTKGTRFSRLYPEADPLAIDLLEKLLVFDPARRINVLEALQHPYLAELYDPCNPSSQVQVNLDIDENWDEQMIREMMWNEMIHYHPEAASDFT* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3853 347 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 344 - -
Tpr3g3853 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Tpr3g3853 347 Pfam Protein kinase domain 15 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3853 347 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 344 - -
Tpr3g3853 347 ProSiteProfiles Protein kinase domain profile. 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3853 347 SMART serkin_6 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3853 347 Gene3D Phosphorylase Kinase; domain 1 2 334 - -
Tpr3g3853 347 SUPERFAMILY Protein kinase-like (PK-like) 4 306 IPR011009 -
Tpr3g3853 347 ProSitePatterns Protein kinases ATP-binding region signature. 18 42 IPR017441 GO:0005524
Tpr3g3853 347 ProSitePatterns MAP kinase signature. 47 150 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tpr3g3853 347 Gene3D Transferase(Phosphotransferase) domain 1 96 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3853 Tpr-Chr3 42983798 42986584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3853 1 342 MAP Kinase Gene Family AT2G18170 76.385 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tpr3g3853 Pkinase 3.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3853 K20537 - gmx:100783422 579.326