Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3847 ATGGAAATTGGAATAGAGGATGAGATTGTGGACATGTCAATGGTACCTCCATCAAGTAGTTCCATGAAGATAGTAAGGAGCAGTGGCTTTGGTCACATTGGTCCCAACAATGAGTTTATGTCTAAGGATGCATACCTTAGAAATAGGTGCTCAGAGATTGATATTGAAGTTGAAGATTCTAGTTTGAACCAAAATGGCCCCCTCCCTATATTTTTAAAGTTTGAAGATGTAGAGTTTAAGGTGAGAAACAGCCAAGCAAGCTCTAATATGAAGACAATGGTGTCAAAGGCAGCTACACCAAACACTATGGAAGAAGATAGATACAAGAAAATTTTGAAGGGTATTACTGGAAACATTGGCCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGCAGTGGAAAAACAACCTTATTGAGAGTTGTAGGAGGAAGATTGCTTGACAATGTAAAAGGAAAAATAACTTACAATGATGTTAAATATACTCCAGCTGTCAAGAGAAGGATTGGTTTTGTGACACAAGAGGATATACTTTTCCCACAATTAACAGTGGAAGAAACATTAATCTTTTCAGCATTCTTAAGGTTACCAACAACTATGAACAAGCAACAAAAATATGCAAAAGTGGAAAAAACTCTGAAGGAGCTTGGTCTGGAAAGATGTCGCCACACGAAAATAGGTGGCGTATCAGGAGGGGAAAGGAAAAGAACAAGCATAGGCTATGAAATTCTTGTTGATCCTTCATTGTTGCTACTTGATGAACCAACTTCAGGCCTTGATTCTACATCAGCAAATAAACTACTTGTCACACTTCAAGGACTTGCTAAGGCTGGAAGGACTTTAATAACAACAATACACCAGCCATCAAGCAGAATCTTTCACATGTTCGACAAACTTCTTTTGATATCAGAAGGCTATCCTATTTACTATGGTACAGCTAGAGAAACAATGGAGTACTTTTCGTCGTTGAGGTTCAGTCCGGAAATAGCCATGAATCCAGCTGAGTTCTTGCTTGACATGGCAACTGGTGAAGTGAATGACATAAGTGTTCCAACAGATATTTTTCATGATCAAGAATCTGCCCATGACTCTTCCAAAGCTGTTATTAAATATCTACAACTCAAGTACAAAACTCTACTGGAGCCAATAGCAAAAGAGAACCAAAGAGGAGTAAACATACCAGAACATCTTCAAGTGGCCATTCAGGTAAAGAAAGAGTGGACATTGAGTTGGTTGGACCAATTTTTTATTCTTTCAAGGAGAACATTTAAAGCAAGATCCAAGGACTATTTTGACAAGTTAAGAATATTTCAAGCAATTGGAGTAGCATTTTTGTTGGGGCTATTTTGGTGGAAATCTTCAATCAACACAGAAGCTCAACTCAGAGATCAGGTTGGATTAGCATTCTACATCTGTATATTCTGGACATCTACATGCATTTTTGCAGCAGTCTATGTGTTTCCATTTGAAAAGTACTTCTTGATAAAAGAAAGGAAAGCTGATATGTATAGATTAAGTGTATACTATGTATGCAGCACTCTATGTGACATGGTGGCACATGTTTTATATCCTACTATTTTCTTGATTATTCTCTACTTCATGGCTGGATTTAAGAGGACTGTTGGTTGCTTCTTCCTCACGTTATTTGTTGTTCTACTAATAGCTATAACAAGTCAAGGTGCAGGAGAATTGTTTGGAGCTGCAGTTATGAATATTAAAAGATCAGGGATGGTTGCTACTTTGGTACTAATGTTATTCCTACTTACTGGTGGCTACTATGTCCAGCACATACCAAAATTCATGCTATGGTTGAAGTATATTTCATTCATGTACTATGGTTTTAGACTACTTCTCAAGGTGCAATATTCAGGAGACGAATTATTTGATTGTGAAGGCAGATGGGGGTGTAGGCCTCTACAAACTTCACCAACATTTGGCACTGTAAACTTGAAAGGTGGCTTAAAAGAAGTTTGGGTCATGGTAGCCATGGCTATATGTTTTCGTTTGTTAGCTTACTTTTGCCTCCGTAGAAAAATTGATGTCTAA 2046 0.3788 MEIGIEDEIVDMSMVPPSSSSMKIVRSSGFGHIGPNNEFMSKDAYLRNRCSEIDIEVEDSSLNQNGPLPIFLKFEDVEFKVRNSQASSNMKTMVSKAATPNTMEEDRYKKILKGITGNIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKITYNDVKYTPAVKRRIGFVTQEDILFPQLTVEETLIFSAFLRLPTTMNKQQKYAKVEKTLKELGLERCRHTKIGGVSGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLVTLQGLAKAGRTLITTIHQPSSRIFHMFDKLLLISEGYPIYYGTARETMEYFSSLRFSPEIAMNPAEFLLDMATGEVNDISVPTDIFHDQESAHDSSKAVIKYLQLKYKTLLEPIAKENQRGVNIPEHLQVAIQVKKEWTLSWLDQFFILSRRTFKARSKDYFDKLRIFQAIGVAFLLGLFWWKSSINTEAQLRDQVGLAFYICIFWTSTCIFAAVYVFPFEKYFLIKERKADMYRLSVYYVCSTLCDMVAHVLYPTIFLIILYFMAGFKRTVGCFFLTLFVVLLIAITSQGAGELFGAAVMNIKRSGMVATLVLMLFLLTGGYYVQHIPKFMLWLKYISFMYYGFRLLLKVQYSGDELFDCEGRWGCRPLQTSPTFGTVNLKGGLKEVWVMVAMAICFRLLAYFCLRRKIDV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3847 681 Gene3D - 101 324 IPR027417 -
Tpr3g3847 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 72 329 IPR003439 GO:0005524
Tpr3g3847 681 Pfam ABC-2 type transporter 414 622 IPR013525 GO:0016020|GO:0140359
Tpr3g3847 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 678 - -
Tpr3g3847 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 321 IPR027417 -
Tpr3g3847 681 CDD ABCG_EPDR 108 311 - -
Tpr3g3847 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 3 678 - -
Tpr3g3847 681 SMART AAA_5 121 307 IPR003593 -
Tpr3g3847 681 Pfam ABC-2 type transporter 286 347 IPR043926 GO:0140359
Tpr3g3847 681 Pfam ABC transporter 112 257 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3847 Tpr-Chr3 42929488 42934365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3847 110 315 Calmodulin-binding Proteins AT2G36910 28.384 2.08e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3847 K05681 - gmx:100806094 1071.61