Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3843 ATGATGGCTACTAGTGCAGTTACATCTTTGCCCAAATTACCACCAGTAAGAAGAGGTGGCCACTGCATTCAAGAGAATGTTGTTCTTACATCTAAATTTCCAAGAGGACTAGTTGCTGTTAATAGTTCAAGATCATTCAGCTGTACACAGTTTCCACTTGGTAGAAGAACTCGTTCTCAGGCAGCAACTATAATATGTGCTGCAGCTTCGAATGCAAGATGTGGTGCAGAGCAAACTCAGACTATTACTCGAGAGGCTCCTACAATTACCCATCTTCCTGGTAAGGAGAAGTCCCCACAACTCGACGATGGCGGAAGTGGATTTCCACCTCGTGATGATGATGACGGCGGGGGAGGAGGCGGAGGAGGCGGCAACTGGTCTGGTGGATTTTTCTTTTTTGGGTTCCTTGCTTTTCTTGGCTTCTTAAAGGACAAAGAAAGTGAAGATGATGGTTATTCTTACAGCGATAACCGAAGAAGGCGGTGA 486 0.4568 MMATSAVTSLPKLPPVRRGGHCIQENVVLTSKFPRGLVAVNSSRSFSCTQFPLGRRTRSQAATIICAAASNARCGAEQTQTITREAPTITHLPGKEKSPQLDDGGSGFPPRDDDDGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEDDGYSYSDNRRRR* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3843 161 MobiDBLite consensus disorder prediction 77 106 - -
Tpr3g3843 161 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 42 159 - -
Tpr3g3843 161 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 42 159 IPR040299 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3843 Tpr-Chr3 42878240 42882530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3843 53 160 C2H2 Transcription Factor Family AT1G56200 69.091 1.25e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3843 - - gmx:100817121 166.777