Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3835 ATGCCTGAAAACTTAAGGAATCTCTCACTTTCTCCCACAAACTTCTCATACACCTTCACCTTACTTATCTTATTAAACTCTATTCTTATCTTTCCATTTTGTTACTCTTACTCACTTAATGAACAAGGCCAAGCTCTTATAGCATGGAAAAACAGTTTAAATAACAGTACTTTAGAAACTTTAGATGCATTATCTTCATGGAATTCTTCATCCATAACACCATGCAATTGGTTTGGAGTGTATTGCAATTCACAAGGAGATGTGATAGAGATAAATTTGAAAGCATTGAGCTTACAAGGCTCATTGCCTTCAAATTTTCAATCCTTAAAGTCCTTGAAGATTCTTATCCTCTCATCAACAAACATCACAGGAACGATACCGAAAGAGATTGGAGACTATAAAGAGCTTATCTTTGTTGATTTAAGTGGAAATTCTCTATCTGGTGAAATACCAGAAGAAATTTGTAGGCTAAGTAAACTTCAAAGTTTGTTTCTTCATACAAATTTCTTTGAAGGAAATATTCCATTTAACATTGGAAATCTTTCAAGTCTTGTGAATTTGACACTCTATGATAATCATTTGAGTGGTGAAATTCCAAAGAGTATTGGTTTGTTGAATAAGCTTCAAGTGTTTAGAGCTGGTGGAAATAAAAATCTTAAGGGTGAGATTCCATTTGAGATTGGAAACTGCACAAACTTGCTCCTATTAGGCCTTGCAGAAACAAGTATTTCTGGAAGCATTCCTTCTTCAATTCAAATGCTGAAAAGAATCAAAACTATAGCTATTTACACAACTCTTTTGTCAGGTTCAATTCCACAAGAGATTGGAAATTGCAGTGAGTTGCAGAATCTGTATTTGTATCAGAATTCTCTCTCAGGTTCAATTCCAACTCAAATTGGAGAACTTAACAATCTCAAGAGTCTACTGTTATGGCAGAACAATTTGGTAGGAAATATTCCAGAAGAGATTGGAAGATGCAAAGAGATTCAAGTCATTGACTTATCAGAAAATCTTTTGACAGGTAGCATACCGAAGATTCTCGGCGAGCTTTCAAATCTTCAAGAGCTTCAATTGAGTGTGAATCATCTCTCAGGTATTATACCTCCTGAGATTTCAAATTGTACTTCTTTGACTCAACTTGAAGTTGACAACAATGCTCTATCTGGTGAGATTCCTCATCTTATTGGTAACTTGAGAAGCTTGAATTTGTTCTTTGCATGGCAGAACAATTTAACAGGAAGAATTCCAGATAGTCTTTCAGATTGCCAAGAGCTTCAATCACTTGATCTTTCTTACAATAATTTGATTGGTGAAATACCTATAAACCTATTTAACTTGAGGAATCTTACAAAACTTTTGCTTATTTCCAATGATTTATCAGGCTTTATACCACCTGATATAGGAAACTGCACAAGCCTCTATAGGCTTAGATTGAATCACAATAGAATATCAGGTAGCATTCCGAATGAGATCGGTAACTTGAAGAGTTTGGATTTTGTTGATATAAGTAGCAATCATCTTGTTGGTGAGATTCCTCCAACACTTTCTGGTTGTCAAAATCTCGAGTTTCTAGACCTTCATTCTAATAGTCTCACCGGTTCGGTTCCAGATTCTCTTCCAAAAAGCCTACAATTGATTGACTTGTCAGACAATAGGCTATCAGGTGAATTGAGTCACACCATTGGTTCATTAGTTGAGTTAAGCAAACTAAACTTAGGAAAGAATCAATTAAGTGGAAGAATCCCATCAGAGATTTTATCTTGTACTAAGCTACAGCTTCTAGACCTTGGAAGCAATAGTTTCACAGGAGAGATTCCGAAGGAATTGAGTCTAATTCCTTCATTGGAAATCTCTCTTAATCTTAGCTTCAACCATTTTTCTGGTGAAATACCATCACAATTCTCTAGTCTTAGCAAATTAGGAGTGCTTGATCTCTCACATAACAAACTCTCAGGCAATTTAGATCCTCTCACTGACCTTCAAAACCTTGTTTCCTTAAATGTTTCATTCAATTCCTTCTCTGGTAAGTTACCTAACACTCCATTCTTCCATAAACTCCCTCTTAGTGATCTTGCCGAAAATGAAGGTCTTTACATTGCTCGAGATGATGTGATTCCTAATAATAGAATTGAAACCAAAAGTCATGAAAAATCTGTCATGAAATCTGTAATGTCCATTCTGTTAAGCACAAGTGCGGTACTCGTTCTGCTCACAGTCTATATCTTGATCCGTTCGCATATAGCGAACAAAGCACTTATGGAAAACGAAAGTTGGGAGGTGACTTTGTATCAAAAGTTTGAACTCTCCATTGATGACATTGTATTGAATTTAACATCGTCCAATGTGATTGGCACCGGAAGTTCAGGAGTTGTGTACAAGGTAACAGTTCCAAACGGCGAAACACTTGCAGTTAAAAAGATGTGGTCATCAGAAGAGTCAGGAGCATTCAATTCTGAAATTCAAACCTTAGGATCAATCAGACACAAGAATATCATTAGGCTTCTTGGTTGGGGATCCAACAGAAACCTAAAGCTGTTGTTTTATGACTATCTTCCCAATGGAAGCCTTAGTTCATTACTTCATGGTTCTGGAAAGGGAAAAGCAGAATGGGAAACAAGATATGATGTTATATTAGGTGTGGCTCATGCACTTTCATATTTGCATCATGATTGTGTTCCTGCTATAATGCATGGAGATGTCAAAGCCATGAATGTGTTATTAGGTCATGGATATCAACCTTACCTTGCTGACTTCGGTTTAGCAAGAATTGTAGTAGCTGAAAATGATGACAATACTAATTCCAAGCCACTCCAAAGACATCATTACCTTGCTGGTTCATATGGATACATGGCTCCTGAACATGCAACAATGCAGCCTATTACTGAGAAGAGTGATGTTTACAGTTATGGTATGGTTCTACTTGAGGTCTTAACAGGAAGGCACCCTTTAGATCCAACTCTTCCAAGGGGTTCAAACATGGTTCAATGGGTTAGGAATCATTTATCTAGCAAAGGAGACCCTTCTGAAATTCTAGATACAAAGCTTAAAGGAAGGGCTGACCCTACCATGCATGAAATGCTACAAACTTTAGCAGTGTCATTTCTATGTGTAAGCACAAGAGCTGCTGACCGTCCAGCAATGAAAGATGTTGTAGCAATGCTCAAAGAAATTAAACCTGTTTCAAGAGGAGACACTGATGTATTGAAATTAGGAGGTTTAACATCACATTGTTCTCCACCACCTCCTAAGAATGTACTTGCACATGGATCATCTACTTGTTCCTATAATTTCTCAGATGGATAA 3303 0.3678 MPENLRNLSLSPTNFSYTFTLLILLNSILIFPFCYSYSLNEQGQALIAWKNSLNNSTLETLDALSSWNSSSITPCNWFGVYCNSQGDVIEINLKALSLQGSLPSNFQSLKSLKILILSSTNITGTIPKEIGDYKELIFVDLSGNSLSGEIPEEICRLSKLQSLFLHTNFFEGNIPFNIGNLSSLVNLTLYDNHLSGEIPKSIGLLNKLQVFRAGGNKNLKGEIPFEIGNCTNLLLLGLAETSISGSIPSSIQMLKRIKTIAIYTTLLSGSIPQEIGNCSELQNLYLYQNSLSGSIPTQIGELNNLKSLLLWQNNLVGNIPEEIGRCKEIQVIDLSENLLTGSIPKILGELSNLQELQLSVNHLSGIIPPEISNCTSLTQLEVDNNALSGEIPHLIGNLRSLNLFFAWQNNLTGRIPDSLSDCQELQSLDLSYNNLIGEIPINLFNLRNLTKLLLISNDLSGFIPPDIGNCTSLYRLRLNHNRISGSIPNEIGNLKSLDFVDISSNHLVGEIPPTLSGCQNLEFLDLHSNSLTGSVPDSLPKSLQLIDLSDNRLSGELSHTIGSLVELSKLNLGKNQLSGRIPSEILSCTKLQLLDLGSNSFTGEIPKELSLIPSLEISLNLSFNHFSGEIPSQFSSLSKLGVLDLSHNKLSGNLDPLTDLQNLVSLNVSFNSFSGKLPNTPFFHKLPLSDLAENEGLYIARDDVIPNNRIETKSHEKSVMKSVMSILLSTSAVLVLLTVYILIRSHIANKALMENESWEVTLYQKFELSIDDIVLNLTSSNVIGTGSSGVVYKVTVPNGETLAVKKMWSSEESGAFNSEIQTLGSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGSGKGKAEWETRYDVILGVAHALSYLHHDCVPAIMHGDVKAMNVLLGHGYQPYLADFGLARIVVAENDDNTNSKPLQRHHYLAGSYGYMAPEHATMQPITEKSDVYSYGMVLLEVLTGRHPLDPTLPRGSNMVQWVRNHLSSKGDPSEILDTKLKGRADPTMHEMLQTLAVSFLCVSTRAADRPAMKDVVAMLKEIKPVSRGDTDVLKLGGLTSHCSPPPPKNVLAHGSSTCSYNFSDG* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3835 1100 SMART LRR_typ_2 350 374 IPR003591 -
Tpr3g3835 1100 SMART LRR_typ_2 494 518 IPR003591 -
Tpr3g3835 1100 SMART LRR_typ_2 637 667 IPR003591 -
Tpr3g3835 1100 SMART LRR_typ_2 181 205 IPR003591 -
Tpr3g3835 1100 SMART LRR_typ_2 564 588 IPR003591 -
Tpr3g3835 1100 SMART LRR_typ_2 302 326 IPR003591 -
Tpr3g3835 1100 SMART LRR_typ_2 446 470 IPR003591 -
Tpr3g3835 1100 SMART LRR_typ_2 109 133 IPR003591 -
Tpr3g3835 1100 Pfam Protein kinase domain 780 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3835 1100 Gene3D Ribonuclease Inhibitor 540 617 IPR032675 -
Tpr3g3835 1100 ProSiteProfiles Leucine-rich repeat profile. 424 447 IPR001611 GO:0005515
Tpr3g3835 1100 SUPERFAMILY RNI-like 90 401 - -
Tpr3g3835 1100 Gene3D Transferase(Phosphotransferase) domain 1 851 1067 - -
Tpr3g3835 1100 Pfam Leucine rich repeat 329 387 IPR001611 GO:0005515
Tpr3g3835 1100 SUPERFAMILY Protein kinase-like (PK-like) 775 1054 IPR011009 -
Tpr3g3835 1100 Pfam Leucine rich repeat N-terminal domain 40 83 IPR013210 -
Tpr3g3835 1100 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1070 - -
Tpr3g3835 1100 SUPERFAMILY RNI-like 332 677 - -
Tpr3g3835 1100 ProSitePatterns Protein kinases ATP-binding region signature. 783 806 IPR017441 GO:0005524
Tpr3g3835 1100 Gene3D Phosphorylase Kinase; domain 1 743 850 - -
Tpr3g3835 1100 ProSiteProfiles Protein kinase domain profile. 777 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3835 1100 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1070 - -
Tpr3g3835 1100 Gene3D Ribonuclease Inhibitor 618 702 IPR032675 -
Tpr3g3835 1100 Gene3D Ribonuclease Inhibitor 344 439 IPR032675 -
Tpr3g3835 1100 Gene3D Ribonuclease Inhibitor 440 539 IPR032675 -
Tpr3g3835 1100 Gene3D Ribonuclease Inhibitor 236 343 IPR032675 -
Tpr3g3835 1100 Gene3D Ribonuclease Inhibitor 39 201 IPR032675 -
Tpr3g3835 1100 ProSiteProfiles Leucine-rich repeat profile. 639 661 IPR001611 GO:0005515
Tpr3g3835 1100 SMART serkin_6 777 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3835 1100 PRINTS Leucine-rich repeat signature 543 556 - -
Tpr3g3835 1100 PRINTS Leucine-rich repeat signature 637 650 - -
Tpr3g3835 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3835 Tpr-Chr3 42815032 42819106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3835 37 1099 Receptor kinase-like Gene Family AT5G56040 65.826 0.0 1392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr3g3835 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3835 - - gmx:100802880 1757.65