Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3834 ATGCCACAGGAGGGGTCCCAAAACTCATTTTTCACATCTCCTTCAAAGAGAGGATTGAAGGGTCTAGTTTCTATGAACATCAAGGAAGTTTCATCGCCTGCCATAGAGGAGAGTTTCAACGATTATGATTTTGCTCATAGGAAAGCAGAAGAAGCAGCTTCAAGAAGATACGAAGCATCAGAATGGTTACGTCAAATGGACAACATTGCATCTTCATTCTTACCACCAAAACCCTCGCAACAACAATTCTGTATCGCACTTCGGAACGGTCTCATTCTCTGCAATGTCCTCAACAAAGTGAATCCTGGTGCTGTTGTCAAAGTTGTGGATAATCCTGCACTTGCTACTGCTTCTTCTACTGTAGAAGGAGCAGCACATTCTGCTATTCAGTATTTTGAGAATATGAGAAACTTTCTTTATGCTGTTAAGGATATGCAACTCTTGACTTTTGAAGCTTCTGATTTAGAGAAGGGTGGTTCATCAAATAAAGTTGTGGACTGCATTCTATGTTTGAAAGGATATTATGAATGGAAACTATCTGGTGGAGTTGGTGTGTGGAGGTATGGTGGAACAGTGAGGATTACTTCCTTACCTAAGAGTTCCCCTTCTTCCTCCATAGTTGGCAGTGAAAGTCTTGATGATTCACTTGACGAGTCTGAGTCATCGCAGTATGAACATCTGCTACAATTTCTTCACCTATCTGAAGATTTCTTGAATGAAGAAACCAAAACTACCAATGTTCTTGTTTTCCTTTTTGATCACTTTGGACTCAGACTTCTTCAGGCTTACCTTAGAGAGACAGATGGGATTGATGATCTGCCTCTTAATACAATGGTAATTGATACCTTACTCAGCAAGGTAGTCAAGGATTTCTCGTCTTTGCTTGTTGCACAAGGCACTGAGCTTGGACTTTTCCTGAAGAAAATATTAAAAGGGGATATTGGGTGTCTCTCAAAGAGGGAGTTTGTAGAAGCTATATCACTATATCTTAATCAAAGAAGTAGTTTGGCATCAAATGATTTCTCCAACTTCTGCAGTTGTGGCGGCAAGCGTGATAGTGTTCGACAAAATGTCAATTACTCTGCAAAATATGGTGAAGTAATCAATACTCAACAGAAACAACTTGAGAGGATGAAATACTTCTTTGAAGATACAAAACTTGAAGTCAAACAAATTCAATCAGAGTGGGAACAAGAATTTAGTAGGCTAGAGCATCATATTAAGAGCCTTGAAGTGGCCTCCACTTCTTACCACAAAGTTTTGGAAGAGAACCGTTTTCTTTACAACCAAGTACAAGATCTCAAAGGAGCAATTAAGGTCTACTGTAGAGTGAGACCCTTCTTACCTGGACAATCAAATGGACAGTCTACGGTAGACTATATTGGAGAAAATGGAGACATGATGATTGTGAATCCCCTCAAGCAAGGAAAAGATGCAAGAAGGGTATTTTCATTCAATAAGGTGTTTGGAACAAGTGTAACACAAGAACAAATTTATGCTGACACTCAACCGTTGATCAGGTCTGTTTTAGATGGTTATAATGTATGTGTCTTTGCATATGGACAGACCGGTTCAGGAAAGACCTACACAATGAGCGGCCCTGATCTATCAGCTGAAGAGACATGGGGTGTAAACTATAGGGCTTTACGTGATTTGTTTTATATATCAAAGGAAAGAGCAGATTCCGTAAAATATGAAGTTTTTGTCCAGATGATTGAAATTTACAACGAACAAGTGAGAGATTTATTAATCAGTGATGGCTCTAACAGAAGATTAGATATACGAAACACCTCCCAACTGAATGGCCTCAATGTGCCTGATGCATATTTAGTTCCGGTTACTTGTACTCGAGATGTTCTACATTTAATGAGAATTGGTCAGAAAAACCGCGCTGTAGGTGCTACAGCTCTAAATGAGAGAAGCAGTCGTTCTCACAGTGTATTGACTGTTCATGTTCGAGGCAGGGAGTTAGTTTCTAACTCCATTCTTAGGGGTTGTCTCCATCTTGTGGATTTGGCTGGTAGTGAGAGAGTTGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATAAATAGATCACTTTCAGCACTTGGAGATGTTATTTCTGCTTTGGCACAGAAAAGTTCACATATCCCTTACAGAAATAGCAAGCTCACACAAGTCTTACAAGATTCTTTAGGAGGGCATGCAAAAACTTTGATGTTTGTTCATATAAACCCCGAACTTAATGCTATTGGGGAGACAATTAGCACACTCAAGTTTGCTGAGAGGGTTGCTTCCATTGAACTCGGGGCTGCTCAATCTAATAAAGAAACCGGTGAAATTCGAGAACTGAAGGAAGAGATATCAAGTCTCAAACTTACATTGGAGAGAAAAGAAACAGAGCTGGAGCAGTTGAAAGCTGGGAATGCTCGAAACACTACAGAATCTCCGAAACCAAGAGCTATTTCACCTTACCATTTGCCCAAATATGGCACCAGTGGACACATGAAGCCTGAAACTAGTCAACGACTTATGGATGATAGAAACTTTGAGGCTAGAAGTTGTTCTTCGGGTAAGCAAAGAAGGTCAAGGTTTCCCTCAGCATTAATGGACAAGGAGTCCATACCGAAAATGTCCCTTCTCACTGAAGAAAAGCTAGTGAGCTCACGGAAAGGAAGAACACCATCACCTCCAGTTAGAAGATCAACATCTACTGATAGAGGGTCAGTTATTAAAAGCAAGTTAAAAAATGATACAGCAGAGAATCAACCGGTATTAAAGCATCCATTTCCCGCTCGAGTACCTGTTAACAAATTCCTTGCCACAATGCCAATGGCTGCATCTCTTGAGAATAATGCAAGGTTGCATGTGAATTCACCAGAGCCTGTAAAGCATGAAGAGGAACAATTCAAGCAAGCACTTAGTGCTGTAAGACAAGGCGGTGTTAGAAAAACTAAGGTTGAAAATAAGGCTAAGGCAAAGCATCATCAACTTTCTCCCTTTAAGCTTCAAAACCCTGATTTGATCCCAACGTTTATTTCTGGCATGGAGTTTGATGGTGAAAAGACACCTCCAAAGAGTGATCACTCTGATCCCGAAAATGATCTTAGATTTGTTGAGTCTGTTGTTCATGGTGCTTTAAATCTCACTAAGATACGTCAGAACTTTCCAAAGAATTTTCAGAACCTTGAATCAAGAAAAATAGTGCAAGGAGGAGAGCCTTTATCAGCAAGCAAAGTTGAGAACAAACTTTTAAACGGTTCGGGCAGCAATCATAAAGAAGGAAATAATCCATCCATGCCTGAATTCAGAAGGAGCCGATCAACGCCACGCGGAAAGTTTTTTGGTTTATCATCATGA 3354 0.4025 MPQEGSQNSFFTSPSKRGLKGLVSMNIKEVSSPAIEESFNDYDFAHRKAEEAASRRYEASEWLRQMDNIASSFLPPKPSQQQFCIALRNGLILCNVLNKVNPGAVVKVVDNPALATASSTVEGAAHSAIQYFENMRNFLYAVKDMQLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSLPKSSPSSSIVGSESLDDSLDESESSQYEHLLQFLHLSEDFLNEETKTTNVLVFLFDHFGLRLLQAYLRETDGIDDLPLNTMVIDTLLSKVVKDFSSLLVAQGTELGLFLKKILKGDIGCLSKREFVEAISLYLNQRSSLASNDFSNFCSCGGKRDSVRQNVNYSAKYGEVINTQQKQLERMKYFFEDTKLEVKQIQSEWEQEFSRLEHHIKSLEVASTSYHKVLEENRFLYNQVQDLKGAIKVYCRVRPFLPGQSNGQSTVDYIGENGDMMIVNPLKQGKDARRVFSFNKVFGTSVTQEQIYADTQPLIRSVLDGYNVCVFAYGQTGSGKTYTMSGPDLSAEETWGVNYRALRDLFYISKERADSVKYEVFVQMIEIYNEQVRDLLISDGSNRRLDIRNTSQLNGLNVPDAYLVPVTCTRDVLHLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGRELVSNSILRGCLHLVDLAGSERVDKSEAVGERLKEAQHINRSLSALGDVISALAQKSSHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNAIGETISTLKFAERVASIELGAAQSNKETGEIRELKEEISSLKLTLERKETELEQLKAGNARNTTESPKPRAISPYHLPKYGTSGHMKPETSQRLMDDRNFEARSCSSGKQRRSRFPSALMDKESIPKMSLLTEEKLVSSRKGRTPSPPVRRSTSTDRGSVIKSKLKNDTAENQPVLKHPFPARVPVNKFLATMPMAASLENNARLHVNSPEPVKHEEEQFKQALSAVRQGGVRKTKVENKAKAKHHQLSPFKLQNPDLIPTFISGMEFDGEKTPPKSDHSDPENDLRFVESVVHGALNLTKIRQNFPKNFQNLESRKIVQGGEPLSASKVENKLLNGSGSNHKEGNNPSMPEFRRSRSTPRGKFFGLSS* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3834 1117 SUPERFAMILY Calponin-homology domain, CH-domain 47 204 IPR036872 -
Tpr3g3834 1117 Pfam Calponin homology (CH) domain 56 176 IPR001715 GO:0005515
Tpr3g3834 1117 PRINTS Kinesin heavy chain signature 512 533 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g3834 1117 PRINTS Kinesin heavy chain signature 635 652 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g3834 1117 PRINTS Kinesin heavy chain signature 666 684 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g3834 1117 PRINTS Kinesin heavy chain signature 715 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g3834 1117 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 22 1111 - -
Tpr3g3834 1117 Gene3D - 44 176 IPR036872 -
Tpr3g3834 1117 SMART kinesin_4 435 773 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g3834 1117 Gene3D Kinesin motor domain 380 767 IPR036961 -
Tpr3g3834 1117 MobiDBLite consensus disorder prediction 1080 1102 - -
Tpr3g3834 1117 MobiDBLite consensus disorder prediction 1080 1117 - -
Tpr3g3834 1117 SMART ch_5 55 174 IPR001715 GO:0005515
Tpr3g3834 1117 MobiDBLite consensus disorder prediction 800 832 - -
Tpr3g3834 1117 MobiDBLite consensus disorder prediction 893 918 - -
Tpr3g3834 1117 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1111 - -
Tpr3g3834 1117 Coils Coil 772 813 - -
Tpr3g3834 1117 Pfam Kinesin motor domain 443 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g3834 1117 ProSiteProfiles Kinesin motor domain profile. 437 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g3834 1117 MobiDBLite consensus disorder prediction 849 924 - -
Tpr3g3834 1117 ProSiteProfiles Calponin homology (CH) domain profile. 53 176 IPR001715 GO:0005515
Tpr3g3834 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 802 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3834 Tpr-Chr3 42792973 42811832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3834 428 765 Calmodulin-binding Proteins AT5G65930 41.860 2.44e-73 264