Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3831 ATGAAAAGACCACGAAAATCAAAGAAAAGGGTTTCCACGAAGGAACAATGGATTATGGAAAAATTTCAAGGACAAAAAGATTGGTGGGAAAATGAAGATCAAAGAGAACAAAAATGGGTCGCTCATTATTGTAGTGATCATCAAATATTGTTGGTGGGTGATGGTGATTTCTCATTTTCCCTTTCCCTTGCAAAAGGGTTTGGTTCTGCTTCAAACATTGTTGCCTCATCGTTTGACACCTACGACGAGGTTACCAAGAAGTACAAGAATGCAAAGTCAAATTTAGTAGAACTGCAGAAGCTGGGAGCATGCCTGTTACATGGAGTGGATGCAACAGCTATGAAATTTTATCCAGATTTAAAAATGCGGAGGTTTGACCGCATTATATTCAACTTTCCTCATGCAGGTTTCCATAGGAAGGAAGATAACTTATTAATGATCAAGATGCATATGGATCTTGTGTTTGGTTTCTTCAAGAATGCAAGTCACATGCTTCGAGCCAATGGTGAGATTCATGTCAATCACAAAACTACACCTCCGTTTGATAAATGGAACTTAGAGAAGCTCGCAGAGCAAAGCTTTATGACAATGATTGAGTGTGTTGATTTCAAGAAGGAAGATTATCCAGGTTATAACAACAAACGAGGAGATAGCTATCGATGCGATGACCCCTTTCCTCTCGGAAAGTGCAGCACGTTCAAGTTTATAAACAATCCTAAAAGTTTGAAAAACCACTTGAGGAGAAACCATATGGAGGTTTCTAGACAACCGATGACAAATCTTCCATTTCAAGAGACTCATTACATTGAGAGGTTTCCAGCTCCTGCTGATCTCAATTATCATCCTCAAACAATTCTTCCATTTCGAGAGATTCCAAAGATCGAACAGGTTCCAACACCAGTTGAACTCAATTATCATCCTCGTGCAAGGCCGCCATTTCAAAATATTCAGAACACGGAGCAATTTCCAGCTCCAGTTGGTCTCAATTATCAGCCTCGAACAAGACTTCGAGAGATTCAGAACATGGAGCAGTTTCCAGCTCCAGTTGATCACAATTATCAGCCTCGAACAAGACTTCAAGAGATTCAGAACATGGAGCAGTTTCCAGCTCCAGTTGATCGCAATTATCATCCTCGGACAAGACTTCCACTTCGAGTGATTGAGAACATGGAGCAATTTCCAGATCAAGTTGATCTCAATTATCGTCTGCAGACAAGTGTCTTTCCAAAAACAAATCAACTCGATTACTATCCTCAGACAAGTCGCTTTCTAAAAATGAATGAACCATTTAGATCAGAGTTTGACTTGAGAAATAGATACAATTCAATCTCAAGGGACTACATCAACCATGAAACAGAAATACACGGAAGAGTTGCTTCTTCTGCCGACTGTTACCATTATGTGCGTAATATGACATTTGAAGATTGGTACAACCAATGGAGTCATTGCAATCCTTGCAACCGTGAGCAACACCAACTAATTGCAGATATTCTCTGA 1497 0.3981 MKRPRKSKKRVSTKEQWIMEKFQGQKDWWENEDQREQKWVAHYCSDHQILLVGDGDFSFSLSLAKGFGSASNIVASSFDTYDEVTKKYKNAKSNLVELQKLGACLLHGVDATAMKFYPDLKMRRFDRIIFNFPHAGFHRKEDNLLMIKMHMDLVFGFFKNASHMLRANGEIHVNHKTTPPFDKWNLEKLAEQSFMTMIECVDFKKEDYPGYNNKRGDSYRCDDPFPLGKCSTFKFINNPKSLKNHLRRNHMEVSRQPMTNLPFQETHYIERFPAPADLNYHPQTILPFREIPKIEQVPTPVELNYHPRARPPFQNIQNTEQFPAPVGLNYQPRTRLREIQNMEQFPAPVDHNYQPRTRLQEIQNMEQFPAPVDRNYHPRTRLPLRVIENMEQFPDQVDLNYRLQTSVFPKTNQLDYYPQTSRFLKMNEPFRSEFDLRNRYNSISRDYINHETEIHGRVASSADCYHYVRNMTFEDWYNQWSHCNPCNREQHQLIADIL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3831 498 Coils Coil 81 101 - -
Tpr3g3831 498 PANTHER BNAC06G26310D PROTEIN 31 236 - -
Tpr3g3831 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 195 IPR029063 -
Tpr3g3831 498 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 50 215 IPR019446 GO:0070042|GO:0070475
Tpr3g3831 498 PANTHER PHENYLALANYL-TRNA SYNTHETASE 31 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3831 Tpr-Chr3 42764299 42767770 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3831 - - mtr:MTR_3g061070 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3831 3 42764299 42767770 Tpr3g3831 3 42764299 42767770 ECH