Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3830 ATGAGTGATTCTCTTTACAAAGTTGAAACAACACCTCGTCTTGCTCAATGGAGAATCGAAAATTTGGCTTCTTGCACTTATCGCAAATCAGATCCTTTCAAGATTGGAAACTGGAATTGGTATTTGTCGGTGGAGAAGCATAAGGTTGTGTTTGTTAAATTGTTTCCTGAAATATCCAATGTAACAAGAGACAATCCTCCAATTGCATCTTTTATCATGCGTGTGGTTAGTTCTGCTTTTGGAGATCGAAAAGCTATCAATCATCCAGAGATAAAGGACAAAGTGATCAAGAGCAATGAGGATTTTGTTTGGACACTTGAGGTTCCATTGTCTGGAAAATTCATTATTGATGTTGATTTCCTTGATTTGAAGATTGCATCCCCAGATGGTGGAGAACCTTGCTCCATATGGGGTGGTGAAGGATTTACTCAAGAGAGATCAAATGCAAGAGCTTTAGGGTCTCTTGGTATAATGCTTAGAGAAAGCATTCACACTGATATCACCATCAATACCTCTGATGGAAGTATAGGAGTTCATAGAGCTGTTCTTTCGTCCCGGTCACCTGTCTTCCGGAGCATGTTTTCGCATGATCTTAAGGAGAAAGAGTTGTCAACCATAAACATCACAGACATGACCATTGAAACATGCCAAGCTTTTTTCAATTATCTTTACGGGATCATCAAAAACGAAGAATTTCTGACACATAGGCTGGCCCTTCTGCATGCAGCCGATAAGTACGATATATCTGACTTGAGAGAAGCCATCCATGAGAGTCTGCTAGAAGATATTGATACTAAAAATGTACTTGAGAGGCTCCAAAATGCATCACTATATCGGTTGACGAAACTGAAGACGAGTTGTATTCAGTACCTTGTTAAATTTGGTAAAATATTTGAAATTCGGGATGATTTCAATACTTTCCTCCAAAATGCGGATAGGGATCTCATTACTGAAGTCTTCGGGGAAATTATTGGTGTCTGGAAAGGATATTGA 993 0.3907 MSDSLYKVETTPRLAQWRIENLASCTYRKSDPFKIGNWNWYLSVEKHKVVFVKLFPEISNVTRDNPPIASFIMRVVSSAFGDRKAINHPEIKDKVIKSNEDFVWTLEVPLSGKFIIDVDFLDLKIASPDGGEPCSIWGGEGFTQERSNARALGSLGIMLRESIHTDITINTSDGSIGVHRAVLSSRSPVFRSMFSHDLKEKELSTINITDMTIETCQAFFNYLYGIIKNEEFLTHRLALLHAADKYDISDLREAIHESLLEDIDTKNVLERLQNASLYRLTKLKTSCIQYLVKFGKIFEIRDDFNTFLQNADRDLITEVFGEIIGVWKGY* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3830 330 Pfam BTB/POZ domain 161 261 IPR000210 GO:0005515
Tpr3g3830 330 SMART BTB_4 165 263 IPR000210 GO:0005515
Tpr3g3830 330 ProSiteProfiles BTB domain profile. 165 224 IPR000210 GO:0005515
Tpr3g3830 330 PANTHER OS08G0495500 PROTEIN 1 330 - -
Tpr3g3830 330 SUPERFAMILY POZ domain 150 261 IPR011333 -
Tpr3g3830 330 PANTHER OS08G0495500 PROTEIN-RELATED 1 330 IPR044714 -
Tpr3g3830 330 CDD BTB_POZ_ZBTB_KLHL-like 164 246 - -
Tpr3g3830 330 Gene3D Potassium Channel Kv1.1; Chain A 143 293 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3830 Tpr-Chr3 42753728 42757159 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr3g3830 BTB 4.8e-19 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3830 K10523 - gmx:100790186 561.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3830 3 42753728 42757159 Tpr3g3830 3 42753728 42757159 ECH
Tpr3g3830 3 42753728 42757159 Tpr4g2659 4 29482465 29487689 PCT