Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3822 ATGACGGCGACACTCACTCTCGCCGGTATCTCCGCCGTCCGGCCACTCCAATTCACCAACAACTGTTCCAATTTCTCCTCCGCAAGATTCATCCAGAAGCCAACTTCCAATTTCTCAAATCGCCGCCGGATTTCAATCCGAGCAGCAACGGCGGTGGTTGAGACACGGCTGCCGGCGACGAGTCTCTACGAAGTTCTACGTTTAAAGCCTGGTGCATCTCCTACTGAGATAAAATCGGCTTACCGGAGTCTGGCTAAGGTTTATCACCCCGACGCGGCGGCGCAGCGGTTGCCGGAGTGTGGTGACGGGGACTTCATCGAGATTCGTAACGCTTATGAGACACTATCTGATCCATCTGCAAGATCAGTTTACGATATGTCACTGATGACGGCACACGGTGGAAGGAACCGGCGATTTACGGCGGCTCCGGTAACACAGAAACGGCAGTCTGGATATTATAGTAATCGGAGATGGGAAACGGACCAATGCTGGTAG 495 0.5333 MTATLTLAGISAVRPLQFTNNCSNFSSARFIQKPTSNFSNRRRISIRAATAVVETRLPATSLYEVLRLKPGASPTEIKSAYRSLAKVYHPDAAAQRLPECGDGDFIEIRNAYETLSDPSARSVYDMSLMTAHGGRNRRFTAAPVTQKRQSGYYSNRRWETDQCW* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3822 164 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Tpr3g3822 164 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Tpr3g3822 164 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 164 - -
Tpr3g3822 164 SMART dnaj_3 60 120 IPR001623 -
Tpr3g3822 164 CDD DnaJ 63 117 IPR001623 -
Tpr3g3822 164 Gene3D DnaJ domain 49 147 IPR036869 -
Tpr3g3822 164 PRINTS DnaJ domain signature 63 81 IPR001623 -
Tpr3g3822 164 PRINTS DnaJ domain signature 81 96 IPR001623 -
Tpr3g3822 164 PRINTS DnaJ domain signature 100 120 IPR001623 -
Tpr3g3822 164 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 164 - -
Tpr3g3822 164 SUPERFAMILY Chaperone J-domain 56 135 IPR036869 -
Tpr3g3822 164 Pfam DnaJ domain 62 125 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3822 Tpr-Chr3 42687642 42688427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3822 63 125 C2H2 Transcription Factor Family AT1G74250 46.970 2.35e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3822 - - gmx:100778445 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3822 3 42687642 42688427 Tpr3g3822 3 42687642 42688427 ECH