Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3815 ATGGCTAGGAGAAATGCTACTCTCTCCATCCGTTTCTTCAAGATCATCCTCCAAACTAATCTTCGAAGACTTAAAATACCAAATAAGTTTACAAAGAGTTATGGAGTTAGTCTATCAAATCCAGTGTTGATCAAGCCTCCTGATGGCACCAACTGGAAAGTTTATTGGAAAAAAGTCAATGGTGAGATTTGGTTTGAAAAGGGTTGGAAAGATTTTACTGAAAATTACTCTCTACAACAAGGTTGTTTGGTGTTATTTAAATATAGAAAAGGAACTTCGAACTTCAATGTACTCATACTTGGCCAGAATGCAATGGAAATAGACTATGGTTCTTCATCTGACACTGATGATGATGAATCGGTTAAGATTGTAGATGAGAAGAACAATAGTATTGATCATAGTGATGATGAATCAGTTGAGATTTTGGATGAATGTCTTAAACGGAAGAAGAACAAACAAAAGTCACCAATAGGTCGATCTCCTCGACCGCATAAGAAAGTTAGAGGTGAGACTGAGAACACTACTAAAAGAACTTCATCACTGAATAGGCCAAGGGAAGCTAGAGGTCAGGAAATAGCTGCAAAATTCATCTCAAGCAATCCTTTTTTCACAATTCTCATAAAGCCTTGTCATCTGTTAAAGGGTCAGCTGTGGATACCAAGTTTAAAAGGTGTTACTCAGAACAAAGACAAGTTTGTGATGCTGCAGATTGGAAAAAGATCATGGAATGTGAAACTGCTTCGTTGTAATGACGGGGAAAAAGGGCGTCGCCTTTCAGGCGGTTGGTGCATGTTTGCAAGTGAAAGTGGACTGAAACCAGGAGATGTTTGTGTCTTTGAACTGATAAACAAGAATGATTTAGTTTTTAAAGTTCATGTTTTCAAAAGGGGACAAATTTAA 900 0.3744 MARRNATLSIRFFKIILQTNLRRLKIPNKFTKSYGVSLSNPVLIKPPDGTNWKVYWKKVNGEIWFEKGWKDFTENYSLQQGCLVLFKYRKGTSNFNVLILGQNAMEIDYGSSSDTDDDESVKIVDEKNNSIDHSDDESVEILDECLKRKKNKQKSPIGRSPRPHKKVRGETENTTKRTSSLNRPREARGQEIAAKFISSNPFFTILIKPCHLLKGQLWIPSLKGVTQNKDKFVMLQIGKRSWNVKLLRCNDGEKGRRLSGGWCMFASESGLKPGDVCVFELINKNDLVFKVHVFKRGQI* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3815 299 MobiDBLite consensus disorder prediction 149 185 - -
Tpr3g3815 299 ProSiteProfiles B3 DNA-binding domain profile. 9 103 IPR003340 GO:0003677
Tpr3g3815 299 ProSiteProfiles B3 DNA-binding domain profile. 202 297 IPR003340 GO:0003677
Tpr3g3815 299 SMART B3_2 12 103 IPR003340 GO:0003677
Tpr3g3815 299 SMART B3_2 202 297 IPR003340 GO:0003677
Tpr3g3815 299 CDD B3_DNA 11 100 IPR003340 GO:0003677
Tpr3g3815 299 Gene3D - 6 104 IPR015300 -
Tpr3g3815 299 SUPERFAMILY DNA-binding pseudobarrel domain 198 296 IPR015300 -
Tpr3g3815 299 CDD B3_DNA 202 295 IPR003340 GO:0003677
Tpr3g3815 299 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 8 295 - -
Tpr3g3815 299 MobiDBLite consensus disorder prediction 163 185 - -
Tpr3g3815 299 Pfam B3 DNA binding domain 19 99 IPR003340 GO:0003677
Tpr3g3815 299 Pfam B3 DNA binding domain 202 296 IPR003340 GO:0003677
Tpr3g3815 299 PANTHER B3 DOMAIN-CONTAINING 8 295 - -
Tpr3g3815 299 Gene3D - 183 297 IPR015300 -
Tpr3g3815 299 SUPERFAMILY DNA-binding pseudobarrel domain 11 110 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3815 Tpr-Chr3 42619202 42620844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3815 12 295 B3 DNA Binding Superfamily AT3G18990 27.353 3.60e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr3g3815 B3 3.6e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3815 - - mtr:MTR_3g061330 340.887