Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3803 ATGGCTTTGATCCTTCACGCTAACCAGGGAAACAAAAATGCTTACAAGACACTGATTACCGCTGAATATGTCGGTGTCGAAGTTCAACTGGTTCCAGATTTTCAGATGGGTGTTTCCAACAAAACTCCTCAATTTCTCAAGATGAACCCTATTGGAAAGGTTCCTGTCTTGGAAACCCCTGATGGTTCCATCTTTGAGAGCAATGCCATTACTCGTTATGTTGCCCGATTGGGTGAAAACAATTTGTTTGGATCATCTCCCATTGATCAGGCCCACGTTGACCAGTGGATTGATTTTTCTTCTTTGGAGATTGATAACAATATTATGAAGTTGTACAGCCCAATACGTGGATTTTCCCCTTACTTTCCTCCGGTAGAGGAGGCTGCAATCTCTGCATTGAAGAGAGCATTAGAGGCTTTGAACACTCACCTTGCCCACAATACTTACCTAGTTGGGGATTCTGTTACCCTTGCTGACATTATAGCAACAAACAACTTGTATTTGGGTTTCACTTATCTCTTTGTCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACCTTGGTCAACCAGCCAAATTTCAAAAAGATATACTAG 609 0.4204 MALILHANQGNKNAYKTLITAEYVGVEVQLVPDFQMGVSNKTPQFLKMNPIGKVPVLETPDGSIFESNAITRYVARLGENNLFGSSPIDQAHVDQWIDFSSLEIDNNIMKLYSPIRGFSPYFPPVEEAAISALKRALEALNTHLAHNTYLVGDSVTLADIIATNNLYLGFTYLFVKSFTSEFPHVERYFWTLVNQPNFKKIY* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3803 202 CDD GST_N_EF1Bgamma 5 77 - -
Tpr3g3803 202 SUPERFAMILY Thioredoxin-like 2 77 IPR036249 -
Tpr3g3803 202 SFLD Glutathione Transferase (cytosolic) 5 189 IPR040079 -
Tpr3g3803 202 CDD GST_C_EF1Bgamma_like 89 202 - -
Tpr3g3803 202 Gene3D Glutaredoxin 1 74 - -
Tpr3g3803 202 SFLD Main (cytGST) 5 189 - -
Tpr3g3803 202 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 201 IPR044628 GO:0004364
Tpr3g3803 202 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Tpr3g3803 202 SUPERFAMILY GST C-terminal domain-like 73 201 IPR036282 -
Tpr3g3803 202 Pfam Glutathione S-transferase, C-terminal domain 127 196 IPR004046 -
Tpr3g3803 202 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Tpr3g3803 202 Gene3D - 79 202 - -
Tpr3g3803 202 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 202 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3803 Tpr-Chr3 42487373 42489183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3803 1 201 Eukaryotic Initiation Factors Gene Family AT1G09640 68.317 6.16e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3803 K03233 - gmx:100787125 325.479