Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3797 ATGATGGCAGCGAAAGGGACAGTGACCCTGTGGCACGCCAGAGAACGACGACGACGGCACTGCGTAGTGCTCACGAAAGACAGAGAAAATAAAACAACGATGGCGAAAACGATGAAGATCTCCCGAAACCGCAGTGATGCATTGAGGTATATTAAGGAAGTAGAAGTTGCCTTTCAATCTAATAGGAAAAAGTATGATGAGTTTTTAAAAATCGTAAAAGATTTGAATTTGAGGAGTGGAACAAGAATTAGTATAAGAGTTATCAAAGCAAAAGTTGAGAGGTTGTTTAAAGGACATTCGGATTTAATTTTGGGATTCAACACCTTATTGCCAAAGGAATATCAAATCATGCTTCCTCAAAGGACTGGCAAAAAGGTGAAGAGGGTAAAAGAAAATTGTGAACTTCCTTGGGATGTGCTTGATATCATTTCCAAAAGACTAGATTTTGATGACCTCTATTTCAGTTTGCTGGTGTGTGCAAGAATTGGAGGGCTTTTCACAAAATTTATTGGAGAAATTTCTTGA 525 0.3867 MMAAKGTVTLWHARERRRRHCVVLTKDRENKTTMAKTMKISRNRSDALRYIKEVEVAFQSNRKKYDEFLKIVKDLNLRSGTRISIRVIKAKVERLFKGHSDLILGFNTLLPKEYQIMLPQRTGKKVKRVKENCELPWDVLDIISKRLDFDDLYFSLLVCARIGGLFTKFIGEIS* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3797 174 Pfam Paired amphipathic helix repeat 64 109 IPR003822 GO:0006355
Tpr3g3797 174 PANTHER PROTEIN, PUTATIVE-RELATED 31 139 - -
Tpr3g3797 174 Gene3D Paired amphipathic helix 46 111 IPR036600 GO:0006355
Tpr3g3797 174 ProSiteProfiles PAH domain profile. 38 113 IPR003822 GO:0006355
Tpr3g3797 174 PANTHER SIN3B-RELATED 31 139 IPR039774 GO:0003714
Tpr3g3797 174 SUPERFAMILY PAH2 domain 41 112 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3797 Tpr-Chr3 42440473 42441748 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3797 45 120 WRKY Transcription Factor Family AT4G12020 44.156 9.82e-13 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr3g3797 PAH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3797 K11644 - cam:101488742 134.806