Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3794 ATGTGGGATGGGTTACTTTCCTGCGCTCGTGAAAACTTGCTTCCTCTAGCTCGTGAACATTTGCTTCCAATAGCCCTTGATCATTTGCTTCCAATACTAAAGGAAGCAGCCAACATGATTAGGGGTGTCCCTACAGATATTGCAGAAATGAAAAATGAACTTCAAAACATTGAAGACTTCATCCATCAAGCAGATAAAACGGCTGATGCTGAAGGAGACAACACAAGTCATGGAATCAGAGCAAAGATCAAGAAACTAATAGAAGCGACTTTTCGCATACAAGATGTCATTGATGAATATATCATCCGTGAGGAGCAACGACTTTCAGATCCTGGATGTGCTGCTGGTGACAACTATGTCAAAACTAAGATTCTCCGTCTCCAAATAGCTCATAAAATTCAGAACATCAAATCCCGAATTAATGAAATAAAAGATACAAGTTCTGAAAAGGATCATGAAGGATCAAGCAGTTCTGCAACAAACCTGAATGCCACATCATTGCAGAACCTTCGGAAGGCTCCTTTTTACATGGATGAAGCCGATGTTGTAGGCTTTGAAGAGCCAAAAGACATATTGATTGATTGGTTGGTAGAAGGAAGAGCAGCGCGAACAGTTGTCTCCGTGGTAGCAATGGGAGGGCAGGGAAAAACCACTCTAGCCAAGAAAGTTTTTGACAACAACAAGGTCATTAAACACTTTGATTGTCATGTATGGATCACAGTGTCTCAATCATACGATCTAGAAAAATTGTTGAGGGACATTTTGCAGAATATTTACAAACAACAGGAAGGTGATACTCCTCAAAGTATACATCAAATGGATCGAGACTCATTAGTTGATGAAGTGAGAAAAAACTTGCAACAAAAAAGGTACGTTGTCATGTTTGATGATGTATGGAGCATACTTTTTTGGGATGAAATTGACCTTGCTATGATTGATAACAAAAATGGTTCTAAGATATTAATCACAACAAGGAACATGAATGTTGCAAATGCTTGTAAGAAATCTTCTTTTGTTGAAGTTCATGAACTGAAACCTTTAACTAAAGAAAAATCTTTGGAATTGTTCAATAAGAAGGCATTCTATGACTTGGACGGATGTTGTCCGGAAAATCTTACTCATATATCTTCTGAAATTGTTGAAAAATGCATTGGATTACCACTAGCAATTGTAATCGTCGGTGGTCTTTTATCTTGCAAAGATAAAGAAACATTTGAATGGTATAATTTTAGTGAAAATATAAATCCTGAGTTAAAGGAAGATTCCAACATAAAAAATATTTTAGGTCTTAGTTACCATAATTTGCCTTACTACCTCAAGTCATGTTTGTTGTATTTTGGATTATATCCTGAAGATTGTGTAGTTTCTTCGAAGACATTGACTCGACAATGGATGGCTGAAGGGTTCGTGAAAGAGGATAGGGGAAAAACTTTGGAAGAAGTCGCAGAAGGATATTTAACAGAGTTAATTCGTAGAAGTTTGGTGCAATTAGTTTCAATCAGTATTGATGGAAGAAGGAGAAGTTGTCGTGTTCATGATCTAGTCCATGCAATGATCCTTGAAAAATGTGAGGATTTAAGTTTTTGTAAGAATATTTGTGAGGACAGACAATCATCTTTAACTGGAATTGTTCGACGCCTATCAATAGCAACCAATTCCGACAATTTAATAGAAAGTGTTGAAAAGCCACAGGTTCGGTCATTGCTTTGTTACGCATCTAAACCATTACCTGAATCCTTTGTAAGGAGAATCCCTACAAAATTCAGGCGGTTGAAGGTGCTGGTTTTGGGTGATGATGGATTGCTTGACGTTCCTAAAGACTTGGGAAGTTTGAGCTACTTGAAGTTTTTTATGTTCGGTGGGGTGTTTCGAGGAAGAAAATTCTCACTTCCAATATCCATTGTTATGCTCGAGAACCTAGAGACCTTGGATTTAACAGATACAAAATTCAATGTTATGCCAAAGGAGATTTGCAAGCTTAGAAAGCTACACCATTTTATAGGCATCAAAATGTCATTGATTCAATTGAAAGATGGTATCGGAGATATGACATCCCTTCAGACGCTACGTGATGTTTATTTAGATGAAAAAGAAGATGAAAATGATAATAGAGTAGTAGAGCTAATCCAAGAGCTAGGAAAGCTAAAACAGCTAAGGGAATTAGCCTTGCTCCGTGTTAGGGCTAAATATATGAGTGCTATATCTTCTTCAATCAACAATATGCGAAAAATGGAGAAACTGCGAATTGAAGGAGCTGGAGAGAACATAGTCATGCATTTGAGTTCACCCCCACCTATGCTTCGGAATCTTAAGCTTAACGGGGATTTAAAGAAGACTCCGGAGTGGATTTCAAAACTTCACAATCTAGCTAAGCTGAAAGTGATGCTTGTGTATTCCAAGCAAACGGTTGAGGTAATGAAATTACTCAAAAGTATGCCAAATTTGTTGTCCCTCAATATTTCCAACGGTGATTATGAAAGCAAATTCGAAACGTTACATTTTCAAGATGGATGGTTTAAGAATTTGAAGGAACTATATGTTGGATATTTTGTTAACTTAAGTTACATCCTTATTGATGAAGGTGCATTGGGTTCTCTAAAAAAGCTAAATAAGCTTCAACACCTAAATAAGCTTGAATTTCTCCATATTTTTGGTATGGGTGACAAATTTATGCAGAGCATTGCTCTCGATGGAGGAAAAGATCATTGGATTTTCAAGCAAGTACCCCATGTAAAAATTTCTGAAGGACACTATCCAGCATCCCCAGCAAAAAAGTGGTGA 2781 0.3718 MWDGLLSCARENLLPLAREHLLPIALDHLLPILKEAANMIRGVPTDIAEMKNELQNIEDFIHQADKTADAEGDNTSHGIRAKIKKLIEATFRIQDVIDEYIIREEQRLSDPGCAAGDNYVKTKILRLQIAHKIQNIKSRINEIKDTSSEKDHEGSSSSATNLNATSLQNLRKAPFYMDEADVVGFEEPKDILIDWLVEGRAARTVVSVVAMGGQGKTTLAKKVFDNNKVIKHFDCHVWITVSQSYDLEKLLRDILQNIYKQQEGDTPQSIHQMDRDSLVDEVRKNLQQKRYVVMFDDVWSILFWDEIDLAMIDNKNGSKILITTRNMNVANACKKSSFVEVHELKPLTKEKSLELFNKKAFYDLDGCCPENLTHISSEIVEKCIGLPLAIVIVGGLLSCKDKETFEWYNFSENINPELKEDSNIKNILGLSYHNLPYYLKSCLLYFGLYPEDCVVSSKTLTRQWMAEGFVKEDRGKTLEEVAEGYLTELIRRSLVQLVSISIDGRRRSCRVHDLVHAMILEKCEDLSFCKNICEDRQSSLTGIVRRLSIATNSDNLIESVEKPQVRSLLCYASKPLPESFVRRIPTKFRRLKVLVLGDDGLLDVPKDLGSLSYLKFFMFGGVFRGRKFSLPISIVMLENLETLDLTDTKFNVMPKEICKLRKLHHFIGIKMSLIQLKDGIGDMTSLQTLRDVYLDEKEDENDNRVVELIQELGKLKQLRELALLRVRAKYMSAISSSINNMRKMEKLRIEGAGENIVMHLSSPPPMLRNLKLNGDLKKTPEWISKLHNLAKLKVMLVYSKQTVEVMKLLKSMPNLLSLNISNGDYESKFETLHFQDGWFKNLKELYVGYFVNLSYILIDEGALGSLKKLNKLQHLNKLEFLHIFGMGDKFMQSIALDGGKDHWIFKQVPHVKISEGHYPASPAKKW* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3794 926 PRINTS Disease resistance protein signature 205 220 - -
Tpr3g3794 926 PRINTS Disease resistance protein signature 285 299 - -
Tpr3g3794 926 PRINTS Disease resistance protein signature 383 397 - -
Tpr3g3794 926 PRINTS Disease resistance protein signature 635 651 - -
Tpr3g3794 926 Pfam Rx N-terminal domain 24 108 IPR041118 -
Tpr3g3794 926 PANTHER DISEASE RESISTANCE PROTEIN RP 50 883 IPR044974 GO:0006952
Tpr3g3794 926 Gene3D - 346 431 IPR042197 -
Tpr3g3794 926 CDD RX-CC_like 24 145 IPR038005 -
Tpr3g3794 926 Gene3D - 432 523 IPR036388 -
Tpr3g3794 926 Coils Coil 47 67 - -
Tpr3g3794 926 Gene3D - 23 145 - -
Tpr3g3794 926 PANTHER - 50 883 - -
Tpr3g3794 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 446 IPR027417 -
Tpr3g3794 926 SUPERFAMILY L domain-like 510 884 - -
Tpr3g3794 926 Gene3D Ribonuclease Inhibitor 548 894 IPR032675 -
Tpr3g3794 926 Gene3D - 160 341 IPR027417 -
Tpr3g3794 926 Pfam NB-ARC domain 186 426 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3794 Tpr-Chr3 42403502 42407275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3794 206 394 WRKY Transcription Factor Family AT5G45050 26.984 6.92e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3794 K13457 - gmx:100819372 798.89