Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3779 ATGAAGAAACCACCAAGCCCCAACCTTCATCAATCTAACCAAAAAAATAAAAACATTGGTCAAAAAAGTGGTACTACTACTAAAAGCAATGGAAATTACACAAATAAACACAATCCTAAGAATGATCATAGTACTATGACATATGTCAAATCTGTTGTCAAAAGCCTTTTTACATTGATTCTATCCGGGAAAACAAAAACAACCTCAGCAACTGTTGAAAATGATTCAACAAGGAATAATAAAGTCAGAGGAGTATCATCTTCAACAGATGTATCATCTGATGGTTCTAAGGGTTCATCAAAATGGAAATCTTCTCAAACTTCAGCATCATCCAGTGCTTCAAATAGTCAAGTTGGATTGGGAAATTTCACATTTGAGGAACTTTACAAAGCAACAGGAAAATTCTCCCAAGATAATGTTATTGGGGAAGGGGCTTTTGGAATTGTATATAAGGGAAAGCTTCATGATGGAACCCTTGTTGCTGTAAAGTGTGCTAGGAAGGATGTACAAAAGAAGCACTTGGCTGAGTTCAAGAATGAAATAAACACATTGTCCAAAATTGAGCATCTAAATCTTGTGAGGTGGTATGGATATTTGGAGCATGGAGATGACAAGATTATTGTTATTGAATATGTAAATAATGGAACTCTTAGGGAACATCTAGATGGTGTGAGGGGAAATGTACTAGAAGTTGGTGAGCGTCTAGACATAGCAATTGATATAGCTCATGCAATTACATACCTTCATATGTACACAGATCATCCAATTATACACAGAGACATAAAAGCATCAAATATCTTAATAACAGACAGTCTAAGAGCCAAAGTGGCAGACTTTGGTTTTGCTAGGTTGGCTCCAGATGACCCAAATGCAACTCATATTTCAACTCAAGTTAAAGGAACAGCTGGTTACTTGGATCCTGATTACATGAGAACACGCCAACTTACTGTAAAGAGCGATGTTTATTCATTTGGCGTGTTACTTGTTGAAATGATGACAGGAAGACATCCAGTTGAACCGCATAAACTACTCGATGAGAGAGTTACAATTAAATGGGCAATGCAGTTATTGAAACAAGGAGAAGCTGTGATTGCAATGGATCCAAGGCTTAGGAGAAATTCAACCTCAAACAAAGCTGTACAAAAGGTTCTCAAGCTTGCTTTCCAATGCCTTGCGCCTGTTAGACGATCGCGGCCATCCATGAAGAATTGTCAAGAGGTTTTATGGGAAATCCGCAAAGAGTTTAGAGAAAAAGTCTTTTCTCGTCCTCCACCGATTGGTCCTCACCATTCGGCAGATTTTCCTCAAAAAGATTCTAGGAAGAAAAGACATAAGACATTTGGTACTGAAGATGATAAGAAAATTAAATTTGTATCAGCATAA 1383 0.3731 MKKPPSPNLHQSNQKNKNIGQKSGTTTKSNGNYTNKHNPKNDHSTMTYVKSVVKSLFTLILSGKTKTTSATVENDSTRNNKVRGVSSSTDVSSDGSKGSSKWKSSQTSASSSASNSQVGLGNFTFEELYKATGKFSQDNVIGEGAFGIVYKGKLHDGTLVAVKCARKDVQKKHLAEFKNEINTLSKIEHLNLVRWYGYLEHGDDKIIVIEYVNNGTLREHLDGVRGNVLEVGERLDIAIDIAHAITYLHMYTDHPIIHRDIKASNILITDSLRAKVADFGFARLAPDDPNATHISTQVKGTAGYLDPDYMRTRQLTVKSDVYSFGVLLVEMMTGRHPVEPHKLLDERVTIKWAMQLLKQGEAVIAMDPRLRRNSTSNKAVQKVLKLAFQCLAPVRRSRPSMKNCQEVLWEIRKEFREKVFSRPPPIGPHHSADFPQKDSRKKRHKTFGTEDDKKIKFVSA* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3779 460 MobiDBLite consensus disorder prediction 420 452 - -
Tpr3g3779 460 ProSitePatterns Protein kinases ATP-binding region signature. 141 167 IPR017441 GO:0005524
Tpr3g3779 460 MobiDBLite consensus disorder prediction 433 452 - -
Tpr3g3779 460 SUPERFAMILY Protein kinase-like (PK-like) 112 411 IPR011009 -
Tpr3g3779 460 Gene3D Phosphorylase Kinase; domain 1 94 211 - -
Tpr3g3779 460 PANTHER OS02G0821400 PROTEIN 1 450 - -
Tpr3g3779 460 Pfam Protein tyrosine and serine/threonine kinase 137 408 IPR001245 GO:0004672|GO:0006468
Tpr3g3779 460 MobiDBLite consensus disorder prediction 67 113 - -
Tpr3g3779 460 Gene3D Transferase(Phosphotransferase) domain 1 212 422 - -
Tpr3g3779 460 ProSiteProfiles Protein kinase domain profile. 135 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3779 460 SMART serkin_6 135 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3779 460 PANTHER OS01G0253100 PROTEIN 1 450 IPR045271 GO:0004714|GO:0006468
Tpr3g3779 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Tpr3g3779 460 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3779 Tpr-Chr3 42196427 42200074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3779 84 451 Trihelix Transcription Factor Family AT1G70460 38.564 1.18e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Tpr3g3779 PK_Tyr_Ser-Thr 7.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3779 - - gmx:100815871 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3779 3 42196427 42200074 Tpr3g3779 3 42196427 42200074 ECH