Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3759 ATGGCTTCTAGTGCTACTTTCTTTAACAAGTTTTACTATCTTTTCATCCTCATTGTTCATCTTGGTTGCTTCATGTTCCCTACCTCCGACGTCGCCGCCACCGGAAAAAAAGATAACCGCCAATTATTACTATTAAAGAAACGAAAAATCTCACCTTTATCTCAACCATCTTCACCTTCACACCCAAAATTCAAAACCCATAAAGCCATTTCTTCTTCTTGGCATTTCATCAAACACCTTTTCTCCACTAACTCTTGCAAAGCTGCCACCGCTACTACCACTCAGTCGTCACCTCAATCCACCTCTACCTCAATCATCACTTCAACCACTGCCAAATCCTCTCAACAATCTCTCATCTCGTTAGTTCAAACCGACCCGAATTTTTCTGATCCACCCCGGAAGAAACAACCCGAATCAGATATCTCCGCCGACAACAACCTCTTCTTCCCCCTCCGTAACGACATCTTCCCATGCACCGCGTGCGGCGAGATTTTCCAGAAACCAAATCTCCTTGAAAATCACCAATCCACAAACCACGCCGTATCGGAACTCACCGGGTCCGACCCGGGTCACAATATAGTCCAAATCATATTCAAATCGGGTTGGCCCGAAACAAACAACTTCCCGAATATCCACCGAGTTCTAAAGATCCACAACAGCCAGAAAATCCTCTCAAAATTCGAAGAATATCGCGAAACCGTGAAATCAAAGGCGGCGCGTAACACACGCCGCCGCGACGAACGCTGCATCGCCGACGGAAACGAACTAATGCGTTTTCACTGCTCAACTTTTCTATGCGAGTTGGGACATAACGGGAATTCATCGATTTGTTCTCAACAATTTTGTAATATTTGCGGAATTATTAAATCAGGTTTTTCACCAAAATTAGATGGAATTTCCACGCTGTCAACTAGCTGGAGGGCAAATTCGTCAATTCCAGATGAAATGGAACGTGAATTTCAGTTCATGAATGTGAAACGGGCCATGCTTGTTTGTCGGGTTATTGCAGGTCGGGTCGGATCTGAATTGGATGATGAAGTGAATAAAACCGATGGAGGTTTTGATTCTGTGATGGCGCGTTCAGAGAGTGGTGTGTACACAAGACTTGATGATGAGGAGTTAGTTGTTTTTAATCCTAGGGCTGTGCTTCCTTGTTTTGTTATTGTGTATAGTGTGTGA 1179 0.4419 MASSATFFNKFYYLFILIVHLGCFMFPTSDVAATGKKDNRQLLLLKKRKISPLSQPSSPSHPKFKTHKAISSSWHFIKHLFSTNSCKAATATTTQSSPQSTSTSIITSTTAKSSQQSLISLVQTDPNFSDPPRKKQPESDISADNNLFFPLRNDIFPCTACGEIFQKPNLLENHQSTNHAVSELTGSDPGHNIVQIIFKSGWPETNNFPNIHRVLKIHNSQKILSKFEEYRETVKSKAARNTRRRDERCIADGNELMRFHCSTFLCELGHNGNSSICSQQFCNICGIIKSGFSPKLDGISTLSTSWRANSSIPDEMEREFQFMNVKRAMLVCRVIAGRVGSELDDEVNKTDGGFDSVMARSESGVYTRLDDEELVVFNPRAVLPCFVIVYSV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3759 392 Gene3D - 181 391 - -
Tpr3g3759 392 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 391 - -
Tpr3g3759 392 ProSitePatterns Zinc finger C2H2 type domain signature. 158 179 IPR013087 -
Tpr3g3759 392 ProSiteProfiles Zinc finger C2H2 type domain profile. 156 184 IPR013087 -
Tpr3g3759 392 PANTHER NUCLEIC ACID BINDING PROTEIN 4 391 - -
Tpr3g3759 392 SUPERFAMILY ADP-ribosylation 182 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3759 Tpr-Chr3 41949864 41951782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3759 74 392 C2H2 Transcription Factor Family AT2G29660 54.545 7.63e-113 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g3759 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3759 - - gmx:100785244 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3759 3 41949864 41951782 Tpr3g3759 3 41949864 41951782 ECH