Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3751 ATGCCTTCAATTGCATCTAAACGTAAACTCAGATCTTCCGCAACAACACCTCTTCCAACCACCGCTTCTCCACCTACTCGTAAATCTCCCCGCCGTTGCACCACTGCAACTCCTAATTCTGTTACAACCGTAGTTCGCAAGATCCTCACTGATGAGAATCATATCGAATCGTGTGAACTTGAATCTAAATCCGTTAGATCCCGATGGAATCCCAAAGACGGTGAGCAATTGAGGATGGTGAAGGAGGTATTGCACTTGTCTACAGCACCGTCTACGATGGTGTGCCGTGAGGAAGAGCAAAATGTGGTGTTGGGATTTTGTAAAGGTTGTGTTGAGCATGAAAAGGCTGGGAGTCTTTACATATGTGGGTGTCCTGGAACTGGGAAATCGTTATCTATGGAGAAAGTGAAAGTGAATTTACGCAATTGGGCTATAGAGGGTGGTTTTTCAGTGCCGGAGGTTTTATCTGTAAATTGTACATCCATGTCAAATACAACTGATATTTTCACAAAGATACTTGGGTTACACAAAACCCTTGGTAAAAAGGATTCAGGCACACCCTTAAAGCAACTTCAGAACTTGTATTCTCATAAATCGCCTACAACAAACATGATATTGATAGTAGCAGATGAATTAGATTATCTAATAACCAAAGACAGAGCTGTGCTCCATGATCTTTTCATGCTCACCACATTCCCGTTTTCCAGATGTATATTGATAGGTGTGGCAAATGCAATTGACCTAGCTGATCGATTTCTTCCAAGGCTTACTGCATTAAATTGCAAGCCTTCTGTTGTAACTTTTCGGGCATACACTAAAGATCAGATCCTTAGGATTCTTGAAGAGAGGCTAAATGAACTTCCTTACATTGTCTTCCAACATCAAGCATTGGAACTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGAAATGCGCTCTCTATATGCAGGAGTGCAATAGAGATGCTAGAAGCGGAAATTAGAGATTCTGCTTGCAATTTGAATACTTTGGAAGAGAAATCATCCTCAGAACAAAATCTCCCTACAGCTCCGGATTTTGTTAAAAAACAAGAATTTGATATGGTAAGGATTGATCATATGGCTCTTGCATTGTCCAAAACATATCGATCACCAGTAGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTCTGCTCTTCAATGAAACATTTCCGTGGATCGAAGAAAGACTCAAACCTTGGCGAGTTATATAAATCTTATGCGGGTATATGCAAATCATCACTAATTCCCCCGGCTGGAATCATGGAATTTTCAAACATGTGCAGAGTGCTAAATGACCAGGGCCTTATTAAACTCGGACAATCCCGAGATGATAAATTGAGAAGAGTGACACCCAAAGTAGATGAAGGAGATATCACTTTTGCATTGCAGGGAATCCGCTTTTTTCGAAATTGTCTTCAATGA 1461 0.4086 MPSIASKRKLRSSATTPLPTTASPPTRKSPRRCTTATPNSVTTVVRKILTDENHIESCELESKSVRSRWNPKDGEQLRMVKEVLHLSTAPSTMVCREEEQNVVLGFCKGCVEHEKAGSLYICGCPGTGKSLSMEKVKVNLRNWAIEGGFSVPEVLSVNCTSMSNTTDIFTKILGLHKTLGKKDSGTPLKQLQNLYSHKSPTTNMILIVADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTALNCKPSVVTFRAYTKDQILRILEERLNELPYIVFQHQALELCARKVAAASGDMRNALSICRSAIEMLEAEIRDSACNLNTLEEKSSSEQNLPTAPDFVKKQEFDMVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGSKKDSNLGELYKSYAGICKSSLIPPAGIMEFSNMCRVLNDQGLIKLGQSRDDKLRRVTPKVDEGDITFALQGIRFFRNCLQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3751 486 Pfam CDC6, C terminal winged helix domain 396 474 IPR015163 -
Tpr3g3751 486 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 331 IPR027417 -
Tpr3g3751 486 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 16 485 - -
Tpr3g3751 486 MobiDBLite consensus disorder prediction 1 37 - -
Tpr3g3751 486 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 16 485 - -
Tpr3g3751 486 SMART Cdc6_C_2 396 475 IPR015163 -
Tpr3g3751 486 CDD Cdc6_C 389 471 IPR015163 -
Tpr3g3751 486 Coils Coil 322 342 - -
Tpr3g3751 486 Pfam AAA domain 114 231 IPR003593 -
Tpr3g3751 486 SUPERFAMILY "Winged helix" DNA-binding domain 381 484 IPR036390 -
Tpr3g3751 486 PIRSF Cdc6 2 486 IPR016314 GO:0006270|GO:0051301
Tpr3g3751 486 Pfam AAA lid domain 293 327 IPR041083 -
Tpr3g3751 486 Gene3D - 73 261 IPR027417 -
Tpr3g3751 486 Gene3D - 262 384 - -
Tpr3g3751 486 Gene3D - 385 471 IPR036388 -
Tpr3g3751 486 CDD AAA 111 257 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3751 7 485 Core DNA Replication Machinery Family AT2G29680 59.635 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3751 K02213 - gmx:100791200 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3751 3 41839884 41844381 Tpr3g3751 3 41839884 41844381 ECH