LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g3737	ATGAAAAGGAAGAGACATCAGAGAAATTTATTATTGGGAAGTTGTCCTATTGCTATGTCTCTAACTGAAAAATACGACGTGTTTATCAGTTTCAGAGGAGAGGATACTCGTGACAACTTCCTGAGTCATCTTAAAGCAGAATTACGAAGAAAAAATATCAATGCATTCATAGATGACGAGATGGACAAAGGCGAACAAATTTCATCGACACTGTACACAAAAATAGAACAATCGATGACTTATGTAATCATTTTATCTGAGCACTATGCTTCTTCAGCATGGTGTTTGGATGAACTCACAAAGATACTTGAGTGCAAACAAACATATGGAAGGGATGTGATACCCGTGTTCTACAAGGTGGATCCGTCAAATGTTAGAAAGCAGAAAAAGACTTATGCGAAAGCTTTCATTAAGCATCAACGGCAAAATAGGGACAAAGTGGAGACGTGGAAGGCTGCTCTTACTCAAGTAGCTGAACTTTCAGGGTGGGATTCAAAAGAAATCAGTTCAGAACATAATCTCGTTACAGACATTGTGGAAGAAATTTTGAGGAAAAAAATGAATTGTCATTGTTTAGTAAGCGATTGTGAAGGAATGATCGGAATGGACAATCATATTGAACAAATCACATCATTGCTGCACCTTGAATCAGAGGCTACTCGGATCATAGGAATTTGGGGTATGTCAGGAATAGGAAAAACAGCAATTTCCCAAGCAATATATCACAGACTCGCACCTCAATTCAATTCCAGCAGCATGATTTTAGATGTTGAAGAAGAAACAAAAAGATTTGGACTGCCCAATATAGAAATTCAATACATGTCAGAGCTTCTAGAGGAAGACAGACTTACCTCTAGACTGCGGTGCTCGTATGTTCAAAGGCTGAAACAAACAAAGGTTCTCCTTGTTCTTGATGATGTGAACACTTCAAATTTAAATATAGAGCCTTCTAACTTCGGCCATGGTAGTAGAATCATTTTGACTAGTAGAGACATGAAAGTGCTTCGGAATGCTAATGCAGATGAGATATACATAGTCAAGGAGATGTGTTTTCAAGATTCACTACGGCTCTTCAGCTTAAATGCATTTAAACAAAAATATCCCCTAAATAATGCTTATGAGGACTTGTCAAAAAAGCTGGTATCAAACTATGCTAAAGGGGTTCCACTAGCTCTAAAGGAGTTAGGCTCATCGCTTTATGGTGAAACAATGGATGCATGGAAAAGTCAGTTGCAAAAGTTGGAAGAATTTCCTAATAAGAATATTTTTGACAGATTTAAATCAAGTTATTATGATGGGCTTGATCCCCTAGAGAAGGACATTTTTCTAGATATAGCTTGCTTCTATACAGGACAATTGGTATATGATGTAGCACATACACTACATAGTTGTGGTTTCTATCCTGTCACTGGACTGAATGTTCTTATAGATAGGGGCATTATATCTATTTCAGAAGATAGAATTGTGATGCATTATCTAATACAAAAAATGGGACAAGAAATTGTTCGTCGGCAGTCTGGAAATGATCCTGGAAATCGGACTCGATTATGGAATCCTGAAGATATTTATCATGTTTTAATAAACAAGGGGTCAAATGCAATCCGGTGTATATTCCTGGACATTTGCAAAATATATAAGGTTCAACTACAAGCTGACACTTTCCAAATGATGAATAATCTTAGAATACTTCAGTTTTATAAGCATTTTGGGCAAGGCAACTCGAATGTGATCTTGCGAGAAGCTATTGAAAACCTTTCTCGTACATTAACATTTCTTTGTTGGGATGGCTTTCCTCAAAAATATCTGCCACCGGAGTTTTGTCCAAAACACCTCGTCATAATTTATATGCGTGAAAGCGATCTTGAGAAACTTTGGGAGGGAGATGATCAGGATTTACCAAATTTGAAAAGACTTGATCTTAGTCGTTCTAAGAAGCTTATTAAAGTGCCAGACCTATCGCTATCTCCAAATATTGAAGAAGTAATTCTTAGTGGTTGTGAAAGCTTGACTGAAGTTTCCTCCTCGAGTTTCCTCAGCAAGCTTAACTGTTTGTGTTTAAATGGTTGTGTTCAGCTTAAGAGTTTGCATCTTCCAAGGAATGTTCTGTCGCGAAATCTTGGATTAGTTGTTCTTTATGATTGTGCCAAGCTTGAACTATCTTCAATCAGCTCTAGAACTCATGTTTTTTTCCACGGGGGCTGTACTCATCTTGTTCGCGTTGAAAATTTATATTTTCTATTCTAA	2244	0.3712	MKRKRHQRNLLLGSCPIAMSLTEKYDVFISFRGEDTRDNFLSHLKAELRRKNINAFIDDEMDKGEQISSTLYTKIEQSMTYVIILSEHYASSAWCLDELTKILECKQTYGRDVIPVFYKVDPSNVRKQKKTYAKAFIKHQRQNRDKVETWKAALTQVAELSGWDSKEISSEHNLVTDIVEEILRKKMNCHCLVSDCEGMIGMDNHIEQITSLLHLESEATRIIGIWGMSGIGKTAISQAIYHRLAPQFNSSSMILDVEEETKRFGLPNIEIQYMSELLEEDRLTSRLRCSYVQRLKQTKVLLVLDDVNTSNLNIEPSNFGHGSRIILTSRDMKVLRNANADEIYIVKEMCFQDSLRLFSLNAFKQKYPLNNAYEDLSKKLVSNYAKGVPLALKELGSSLYGETMDAWKSQLQKLEEFPNKNIFDRFKSSYYDGLDPLEKDIFLDIACFYTGQLVYDVAHTLHSCGFYPVTGLNVLIDRGIISISEDRIVMHYLIQKMGQEIVRRQSGNDPGNRTRLWNPEDIYHVLINKGSNAIRCIFLDICKIYKVQLQADTFQMMNNLRILQFYKHFGQGNSNVILREAIENLSRTLTFLCWDGFPQKYLPPEFCPKHLVIIYMRESDLEKLWEGDDQDLPNLKRLDLSRSKKLIKVPDLSLSPNIEEVILSGCESLTEVSSSSFLSKLNCLCLNGCVQLKSLHLPRNVLSRNLGLVVLYDCAKLELSSISSRTHVFFHGGCTHLVRVENLYFLF*	748

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g3737	747	Pfam	NB-ARC domain	203	420	IPR002182	GO:0043531
	Tpr3g3737	747	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	188	445	IPR027417	-
	Tpr3g3737	747	Pfam	TIR domain	24	188	IPR000157	GO:0007165
	Tpr3g3737	747	PRINTS	Disease resistance protein signature	222	237	-	-
	Tpr3g3737	747	PRINTS	Disease resistance protein signature	294	308	-	-
	Tpr3g3737	747	PRINTS	Disease resistance protein signature	385	399	-	-
	Tpr3g3737	747	PRINTS	Disease resistance protein signature	630	646	-	-
	Tpr3g3737	747	SMART	till_3	24	160	IPR000157	GO:0007165
	Tpr3g3737	747	Gene3D	-	20	188	IPR035897	-
	Tpr3g3737	747	Gene3D	Ribonuclease Inhibitor	526	745	IPR032675	-
	Tpr3g3737	747	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	17	725	-	-
	Tpr3g3737	747	SUPERFAMILY	L domain-like	526	725	-	-
	Tpr3g3737	747	SUPERFAMILY	"Winged helix" DNA-binding domain	431	526	IPR036390	-
	Tpr3g3737	747	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	17	725	IPR044974	GO:0006952
	Tpr3g3737	747	SUPERFAMILY	Toll/Interleukin receptor TIR domain	22	163	IPR035897	-
	Tpr3g3737	747	Pfam	Leucine Rich Repeat	610	627	IPR011713	-
	Tpr3g3737	747	Gene3D	-	351	435	IPR042197	-
	Tpr3g3737	747	ProSiteProfiles	TIR domain profile.	23	186	IPR000157	GO:0007165
	Tpr3g3737	747	Gene3D	-	189	347	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g3737	Tpr-Chr3	41712403	41718325	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr3g3737	4	733	WRKY Transcription Factor Family	AT4G12020	32.095	3.23e-90	308

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g3737	-		-	mtr:MTR_3g464030	956.436