Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3732 ATGCAGGTTTTTCCAACTGAGAAGCAGAAAATGGATAACTCTGAATTCATGATGTACACGTTTAAAGTTGTATCTTGTAAAATACGTCACTCTCATGACTGGAGTAGGTGCTGCTATGTGCATCACGGAGAAGATTCAAGAAGGCGTGATCCAAGAAAGCATCATTATAGCTCTGTCATTTGTCCCGAGTTTAGCAACAGTTGGCGCTGCAGCAAAGGAGAGTCCTGCCCATTTTCTCATGGAAGGTATGAGTGGGGGCTTCACCCTTCTCATTACCGAACCAGGTTTTGCAACAATGGAACTGAATGCACACGAGAGGTGTGCTTCTTTGCTCACAAACCGGAGGAGATTCGCAGGCCAGAAAATTCTTCTGCTTATTCTTTGCCTACACCTCTATCAAATTCAGGTAGTGCTCACCCTTTCAGACTGCGCCCACCAACAATTCAGATGCCGATGAATTTCGCAAGAAACACCGATCTGCACAATGAGTTTCGCACAAACCAGAATATGCGCAGGCTTCCAGGAATCCAGGTGGATCAACGGGGCTATCCTCCATACTCTACAAATTCAGATGTAATTGGATTACCACAATCCAGGGCTGATCCATCTATGAGTTCAAGATATGATGCCACTTCGAAGCGAAGCCAAGAATTTATTGAGCACAGTAGTATGCCGAGTTTTAATCCTAATCTTTCATCTGCTACATCAGTTTCTGCAGAGCCTTCTAACTTATCCGGTTGGGGCTCAGGTGATCGAAAATTAGACTGGTCTATACCTGGTGATGAACTCAATAGGAGGACAAAATTGTATTCTTCTGGCCTTGGAAACAAAAGCAGCATTCCAACAATGGCGGCGCCAAATGTTGATGATCCGGATGTGTTGCTAAGCGAAGAACCATGGGTTGAATCACTTTTGAAGGATGATGACCCAACATCGGGTTCTGATCATTAG 951 0.4458 MQVFPTEKQKMDNSEFMMYTFKVVSCKIRHSHDWSRCCYVHHGEDSRRRDPRKHHYSSVICPEFSNSWRCSKGESCPFSHGRYEWGLHPSHYRTRFCNNGTECTREVCFFAHKPEEIRRPENSSAYSLPTPLSNSGSAHPFRLRPPTIQMPMNFARNTDLHNEFRTNQNMRRLPGIQVDQRGYPPYSTNSDVIGLPQSRADPSMSSRYDATSKRSQEFIEHSSMPSFNPNLSSATSVSAEPSNLSGWGSGDRKLDWSIPGDELNRRTKLYSSGLGNKSSIPTMAAPNVDDPDVLLSEEPWVESLLKDDDPTSGSDH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3732 316 MobiDBLite consensus disorder prediction 195 237 - -
Tpr3g3732 316 Gene3D - 54 119 - -
Tpr3g3732 316 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 15 152 - -
Tpr3g3732 316 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 182 310 - -
Tpr3g3732 316 ProSiteProfiles Zinc finger C3H1-type profile. 56 83 IPR000571 GO:0046872
Tpr3g3732 316 PANTHER UNKEMPT FAMILY MEMBER 182 310 IPR045234 -
Tpr3g3732 316 PANTHER UNKEMPT FAMILY MEMBER 15 152 IPR045234 -
Tpr3g3732 316 SMART c3hfinal6 55 82 IPR000571 GO:0046872
Tpr3g3732 316 SMART c3hfinal6 91 114 IPR000571 GO:0046872
Tpr3g3732 316 SUPERFAMILY CCCH zinc finger 54 86 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3732 Tpr-Chr3 41661977 41662927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3732 15 122 C2H2 Transcription Factor Family AT5G07500 51.852 4.72e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr3g3732 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3732 - - mtr:MTR_3g464290 212.616