Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3706 ATGAAAGTAGCATGGAGATTCATTACGTTCATAGTAATTATTGGGGTGATGGTGTCTCTCCAATTGAATTCATGTCATGGGTTGGTACTTGAAAAGATGAGGGAGAGGATGGTGAGATATCCATTGGAGGTTTTATTGAAGTGGAATGGTAAAGAAGGAGTCATTGATACATGCTTTTGGTTTGGAGTGGAATGCAATGTTGTGAACTTGCACATTGGCCAACAAGGGGATATACCATATAGCAGGAAACTTATACAAACAGAAAATTCTGCTAACTCACACAAAACCAAGAAGGTTGATGACAAAGAGACTTCTTCACCATCATCATCACCATTTTCTAAACATATTTCACCATCACAAAGTGTCTCAAATTCACCATCTCCATCAATTTTCCTTCAATCATCAATAGCATCACCGGAACTTTCCCCTTCGCCATCAATCTCTCCCTCGCCTTCACCTGTAATAGCGCCGACAACTTCAGACTTACCACTTACATCAAATCCACCTACAATTGTGTCCACACAAGAACATTCTAATTGGATTTCAGCAACTTCTCCTACTTCATCTTCAAACCAAAGGAATTCAAACAGTTCAAACCAAAAGCAACATTCTGTTATTATATGGTCAACAGTTGGAGGGTTCTCCTTCCTGGTTTTGGTGTCATTCGCTGTTTTTGTTTGCTTCAGAAGTAGTAAGGTTGCTACCGTAAAACCTTGGGCTACAGGGTTGAGTGGCCAGCTTCGAAAAGCATTTGTAACAGGTATTCCAAGTCTTAAACGAGCCGAACTAGTAGTAGCTTGTGAAGATTTCAGCAACATTATTGGTTCTTTACAAGACGAGACTATCTATAAGGGAACTCTTTCAAGTGGAGTTGAGATAGCTGTAGTATCCTCTTCCATGACTTCATCTCAAGACTGGTCAAAAACTATGCAAGCTCAGTTCCGAAAGAAGATTGAGATGTTATCAAGGGTAAACCATAAGAACTTTGTGAATCTTATTGGTTATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACGCTGTTTGAGCATCTACATATTAGAGAAGCCGAACAACTAGACTGGAGGACGAGAATGAGGATAGCTATGGGAATAGCATACTGTCTAGACCACATGCATCATCTAACACCACCTATTGCACAAAGAAACCTTCTGTCTTCCTCTATATACCTCACCGAAGATTATGCTGCTAAAATATCAGACCTTAGTTTCTGCACCGACAAAGTCAATACAAAGAAGGTTTCCGAAAAAACCTCAGCAGAAGAAATAAACGATAATGTGTATAGCTTTGGCGTAATATTGTTTGAATTGTTAACAGGAAAAATTCCCTATGCAGTGGAAAATGGTTTTCATACAGATTGGGCTGCAGAATATATAAAAGGACAACCATTGAGAGAGTTGGTCGATACAACCATATTGAACTCTTTGAAAGATCATGAAATTGAGAAATGGTCAGAAGTGATTAATAATTGTGTAGATCTTGATCAAGAAAAAAGGCCATCAATGAAAGAGATTACATCTAAGTTGAAGGAGATTACTGACATGGAACCTGATGGAGTAACTCCAAAATCATCACCTCTTTGGTGGGCTGAAGTTGAAATTATGTCCACAGATTTATGTTGA 1668 0.3873 MKVAWRFITFIVIIGVMVSLQLNSCHGLVLEKMRERMVRYPLEVLLKWNGKEGVIDTCFWFGVECNVVNLHIGQQGDIPYSRKLIQTENSANSHKTKKVDDKETSSPSSSPFSKHISPSQSVSNSPSPSIFLQSSIASPELSPSPSISPSPSPVIAPTTSDLPLTSNPPTIVSTQEHSNWISATSPTSSSNQRNSNSSNQKQHSVIIWSTVGGFSFLVLVSFAVFVCFRSSKVATVKPWATGLSGQLRKAFVTGIPSLKRAELVVACEDFSNIIGSLQDETIYKGTLSSGVEIAVVSSSMTSSQDWSKTMQAQFRKKIEMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWRTRMRIAMGIAYCLDHMHHLTPPIAQRNLLSSSIYLTEDYAAKISDLSFCTDKVNTKKVSEKTSAEEINDNVYSFGVILFELLTGKIPYAVENGFHTDWAAEYIKGQPLRELVDTTILNSLKDHEIEKWSEVINNCVDLDQEKRPSMKEITSKLKEITDMEPDGVTPKSSPLWWAEVEIMSTDLC* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3706 555 MobiDBLite consensus disorder prediction 89 125 - -
Tpr3g3706 555 MobiDBLite consensus disorder prediction 105 125 - -
Tpr3g3706 555 ProSiteProfiles Protein kinase domain profile. 268 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3706 555 Pfam Protein tyrosine and serine/threonine kinase 274 524 IPR001245 GO:0004672|GO:0006468
Tpr3g3706 555 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 10 71 - -
Tpr3g3706 555 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 98 553 - -
Tpr3g3706 555 PANTHER PROTEIN MALE DISCOVERER 2 98 553 - -
Tpr3g3706 555 PANTHER PROTEIN MALE DISCOVERER 2 10 71 - -
Tpr3g3706 555 Gene3D Transferase(Phosphotransferase) domain 1 351 536 - -
Tpr3g3706 555 SUPERFAMILY Protein kinase-like (PK-like) 254 524 IPR011009 -
Tpr3g3706 555 Gene3D Phosphorylase Kinase; domain 1 246 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3706 Tpr-Chr3 41270375 41274431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3706 254 529 Receptor kinase-like Gene Family AT3G19300 31.987 5.79e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tpr3g3706 PK_Tyr_Ser-Thr 6.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3706 - - var:108343001 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3706 3 41270375 41274431 Tpr3g3706 3 41270375 41274431 ECH