Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3705 ATGGCTGCTGAGCAAGGTGATAGATTTTCCTCCATTGAAGTACCACTTTTGGATGATGAAAAAGTGTACAAAGTGAATGGTTCAAAAACTAAGGATGAACATCACACGGTTCATGAGGGTAACACTTCTTTATTCAAGACTTGCTTCCATCTTGTTAATGGCATCTCAGGAGTTGGTATTGTTTCAATACCTTATGCACTAGCATCAGGAGGATGGTTAAGCATAATCCTACTATTTACAATAGCCATAGCATGTTGTTACACAGGAACATTAGTCAAAAAATGCATGGACATGGATCTTAATATCAGAACTTTCCCTGACATAGGTCAATATGCATTTGGATCAAAAGGAAGATTAATAGTATCAATAATCATGAATTCAGAACTTTATCTAGCAGTAACTGGTTTTCTAATTCTAGAAGGAGACAACCTTAACAAACTAATACCAAATATGGAAATTAACATAGGTGGTTTAACAATTGGTGGCACAACAATGTTTACTATGGTTACTACAATTGTTATTTTGCCTACTGTTTTGTTTGAAGATATGAGTTTGTTGTCTTATGTTTCTGCTAGTGGTGCTATAGCTTCTTCAATCTTCATTTTTTCTTTGTTTTGGAATGGTGCTGTTGATGGAACAGGGTTTCATGGTAAAGGAAGGGTTTTTAATTTGAGTGGAATACCTTCTGCTGTTAGTTTGTATGCTTTTTGTTATAGTGCTCATCCGATTTTGCCGACTCTCTACAATTCTATGAGGAATAAAAGTCATTACTCCGGGGTCCTATTTGTAAGCTTTTCAGCATGCACATTTGGTTATGCAGCAGCAGCAATTCTAGGCTACTTAATGTTTGGACAAGAAGTTGAATCACAAGTAACTCTAAACCTTCACACAGGAAAATTAAGTTCAAGAATAGCTATATACACAACCTTAGTCAATCCAATAGCAAAATATGCATTGATGCTTACACCAGTCATAAATGCAATAAAAATGAAGGTTTCATGCAATTACTCCAACAAAAGAGTCACACATATGATTATTAGTACATCATTACTAGTAAGTTCTCTTATTATAGCAGTGACCATTCCTCTATTTGGATACCTTATGTCACTTGTTGGAGCAATGTTAAGCGTCTCGGCTTCAATTTTAGTTCCGTCGATTTGTTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGAAGTGAAATGATTGTTAACTATTTGATTATTGTGATGGGGGTTGCTATTGCTGTTTTTGGTACTTATAGATCTCTTGTAGATATAATTCAAAACTTGTAA 1296 0.3495 MAAEQGDRFSSIEVPLLDDEKVYKVNGSKTKDEHHTVHEGNTSLFKTCFHLVNGISGVGIVSIPYALASGGWLSIILLFTIAIACCYTGTLVKKCMDMDLNIRTFPDIGQYAFGSKGRLIVSIIMNSELYLAVTGFLILEGDNLNKLIPNMEINIGGLTIGGTTMFTMVTTIVILPTVLFEDMSLLSYVSASGAIASSIFIFSLFWNGAVDGTGFHGKGRVFNLSGIPSAVSLYAFCYSAHPILPTLYNSMRNKSHYSGVLFVSFSACTFGYAAAAILGYLMFGQEVESQVTLNLHTGKLSSRIAIYTTLVNPIAKYALMLTPVINAIKMKVSCNYSNKRVTHMIISTSLLVSSLIIAVTIPLFGYLMSLVGAMLSVSASILVPSICYLKISGAYKRFGSEMIVNYLIIVMGVAIAVFGTYRSLVDIIQNL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3705 431 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 429 - -
Tpr3g3705 431 PANTHER OS05G0424000 PROTEIN-RELATED 1 429 - -
Tpr3g3705 431 Pfam Transmembrane amino acid transporter protein 41 423 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3705 Tpr-Chr3 41262478 41266959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3705 28 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.117 1.12e-151 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3705 K15015 - gmx:100784690 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3705 3 41262478 41266959 Tpr3g3705 3 41262478 41266959 ECH