Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3688 ATGGGATCAGGTTCCTCTCCTTGTGCTTCTTGCAAATTGTTGAGAAGGCGTTGCATACAAGAATGCATCTTTGCCCCTTACTTTCCTTCTGATGATCCACGCAAGTTTGCCATTGTTCATAAGGTCTTTGGTGCTAGCAATATCAGCAAAATGCTGCAGGAGCTTCCAATTCATCAAAGAGCAGAAGCAGTAAACAGTTTAGTTTATGAAGCAAATGCAAGAGTGAGAGATCCTGTTTATGGATGTGTTGGAGCCATATCATACCTTCAAAGTCAAGTTTCACAATTACAAATGCAACTTGCAGTAGCTCAAGCAGAGATACTCTGCATCCAGATGCAACAAGACTCTGCCACTGTTACTGACTCATTACCAACACATGTTGACCAAGATGACAAATTCATGCTCTTATCTGAAAATAATAATTGCTATGGAGTCCTTCCACAATATCTCAACTTTCCATCTTCTTCTTCATCATCTTCTAATGTATTCCAAGATTATGAGCCTCTTAAGAGTGAGACTTTTTGGACTTAA 531 0.3955 MGSGSSPCASCKLLRRRCIQECIFAPYFPSDDPRKFAIVHKVFGASNISKMLQELPIHQRAEAVNSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLAVAQAEILCIQMQQDSATVTDSLPTHVDQDDKFMLLSENNNCYGVLPQYLNFPSSSSSSSNVFQDYEPLKSETFWT* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3688 176 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 1 172 - -
Tpr3g3688 176 Coils Coil 86 106 - -
Tpr3g3688 176 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Tpr3g3688 176 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Tpr3g3688 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3688 Tpr-Chr3 41091067 41094052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3688 2 176 AS2 family AT2G30130 63.874 3.21e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr3g3688 LOB 1.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3688 - - gmx:100819419 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3688 3 41091067 41094052 Tpr3g3688 3 41091067 41094052 ECH