Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3686 ATGTCAAAGGCTGTTTGTGTCACGGGAGCCAGCGGAGCCATCGGATCATGGGTGGTTCGCATCCTTCTCGAACGCGGCTACATCGTCCACGCCACCATCCAAGATCTCGAGGATGAGAACGAGACAAAACATTTGGAAGCAATGGAAGGAGCAAAAGGTCGTCTCAAATTTTTCGAAATGGATCTTCTTAACAGCGACTCTATTGCGGCCGCCGTGAAAGGTTGTGCCGGAGTTATACATCTTGCATGTCCTAACATCATTGGTGAAGTCAAAGACCCCGAGAAGCAAATTTTGGAACCGGCAATTCAAGGAACGGTTAACGTGTTGAAGGTGGCAAAGGAAGCAGGAGTGGAGCGTGTGGTGGCGACGTCGTCAATCTCCGCCATCATACCGAGTCCTAATTGGCCAGCTGATAAGATTAAGGCAGAAGATTGTTGGACAGACCTTGAGTATTGCAAGGAGAAGAAGTTATACTACCCCATTGCAAAGACACTAGCAGAAAAAGCTGGTTGGGAATTTGCTAAAGAGACTGGTTTTGATGTTGTGATGATTAACCCTGGTACTGCTTTGGGCCCTTTGATTCCACCAAGAATTAATTCTAGCATGGCTGTTCTTGCTGGTGTTCTCAAAGGTGACACAGAGACATATGAGGACTTCTTCATGGGAATGGCCCATTTTAAAGACATAGCTTTGGCACATATTTTGGGTTTTGAGCAAAAGAAAGCATCTGGAAGGCATTTGTGTGTGGAAGCTATTCGTCACTATAGTGATTTTGTCAATTTGGTTGCAGATTTATACCCTGAATATAATGTTGCAAAGTTGCCAACGGATAAACAACCTGGATTGTTGAGAGCAAAGAATGCATCAAAGAAGTTGATTGAATTAGGTCTAGAGTTTACTCCAGCTGAACAAATTATCAAGGATGCAGTTGAGTGTTTGAAGAGCAGAGGTTTAGTTTAA 960 0.4417 MSKAVCVTGASGAIGSWVVRILLERGYIVHATIQDLEDENETKHLEAMEGAKGRLKFFEMDLLNSDSIAAAVKGCAGVIHLACPNIIGEVKDPEKQILEPAIQGTVNVLKVAKEAGVERVVATSSISAIIPSPNWPADKIKAEDCWTDLEYCKEKKLYYPIAKTLAEKAGWEFAKETGFDVVMINPGTALGPLIPPRINSSMAVLAGVLKGDTETYEDFFMGMAHFKDIALAHILGFEQKKASGRHLCVEAIRHYSDFVNLVADLYPEYNVAKLPTDKQPGLLRAKNASKKLIELGLEFTPAEQIIKDAVECLKSRGLV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3686 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Tpr3g3686 319 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Tpr3g3686 319 CDD FR_SDR_e 5 297 - -
Tpr3g3686 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Tpr3g3686 319 Gene3D - 1 319 - -
Tpr3g3686 319 Pfam NAD dependent epimerase/dehydratase family 5 197 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3686 Tpr-Chr3 41067697 41072008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3686 3 319 Monolignol Biosynthesis Gene Families AT5G58490 64.984 6.32e-160 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3686 - - gmx:100806281 537.339