Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3674 ATGGAGGGTATCTCGACAGATTTGGGGAAGACATTTGTAGAGAAATTGATAAACGGTGTAATAGGAAAATCACGTTATCTATTTTGCTACAAGTGCATTGCCAACGAATTTGAATTAGAGAAGGAAAAATTGGAAGCAGAATGGGAAACTATGACACTGCGTTTTACAAAGGCAAAGGAAAAAGGTAAAGATATTCAATCTAATGCTCAATTTTGGGAAAAGCAAGCTAATAAGCTCATTCAAGAGAACACTAAGTTAAAACAAAGATGTTTTTTTGGATTTTGCCCTGATTGCATATGGCTATATAAAAGGGGAGAGGAGTTGGCAAACAAAACGGAGGAAATTAAAAAATTGATGGTAAAGGGAGAGAAACTTGAAAATGTTGAAGTCACCCGTAGTCTTCCAGATGTTGAGCGTTATTCTTCTCAATCTTACATTTCTTTTAAAACTAGGGAGTCGAAATACAATGAGCTTTTGAATGCACTAAAAGATGACAGTTACTATACAATTGGATTGCATGGGATGGGGGGCACAGGAAAAACTACCATGGCAAAAGAAGTGGGCAAACAACTTAAGACTTCAATGCAATTTAATCGTGTCATCTTTACTACAGTGTCCAGTACTCCTAATATAAAAAAGATTCAAGATGATATTGCTGGACACTTGGAATTGGAATGGAGGGACACCAATGAGTCAACCCGGCCTACACAGCTATGGGACAGACTCATCAATGGTGAGAAAATTCTTGTGATATTGGATGATGTTTGGGATTATCTCAATTTTGAAGACATAGGGATTCCAAATAGTGATAATCACAAAGGATGCAAAGTTCTTGTAACCACACGATATTTGAAGGTATGCAACAAAATGTCATGTGCAACAACAATTCAAATAGAGCTCTTATCTGAAGAAGAGGCATGGGAAATGTTCAAAAGGCATGCTGAGCTAAGTAATATTTCCTCCAAAAATATTCTTGACCAGGGATCCAAAATTGCACTTGAATGCAAAGGATTACCAATTGCAATTGCTACTATCGCCAGAAGTTTGAAGGGAGAAAAACGTCAAGAAAATTGGGATGCTGCCTTAAACTCCTTACAAAATCCTATGCTCATGGCCGGTGTTGATGACACTAAGGTTGACATTTATAAATGTTTGAAGTTTAGCTATGATAATTTGAAGGATAAAGAAGCCAAGGAATTGTTCCTCTTATGTTCTATATTCCAAGAAGATGAAGAAATCTCTACTGAAATTCTAACCAGACTTGGCATAGGAATCGGGCTCTTTGGGGAAGATTATAAAAAATACAACCATGCTCGAACTCTTGTAGTTGTAGCAAAAGATAATCTCCTTGATTCATGTCTACTGTTGAGTACAAATAAAAGAGATGTAAAAATGCATGACTTGATTCGTGAAGTAGCCCAATGGATTGCAAATAAAGAGATACTAGCAGTAGATTTTTCTAACAAAACTCAAAAGTCATTAGTTGGAAGGGATAACAATATCAAATATTTGTTATTTGAGGGAAATCCAATGGATTTGTGTTCCTCTGGGTTTGATGGTTCTAAACTTAAGATTCTGATTTTCATTGTGGACAATGGTTGCTTTGTTGATTCATTCTTTAAAAGTATTGCAGGGCTTCTAGTTTTGAATTTAAGAGCAGGTAAACAAAGTACTATATCATTACCACAATCAATTCGGTCATTGACGAATATTCATTCTCTATTAATTGAAAGTGTCTATTTGGGTGACATATCTGTTTTGGGAAGCCTGCAAAGTCTTGAGACACTTGATTTGAATCAATGTATAATTGAAGAACTTCCACAAGAAATTGCTAAATTGAAGAAACTTCGATTGTTGAACTTGGAAATGTGTGAAATTATAGATAAGAATCCATTTGAAGTTATCCAAAGATGCCCATCACTTGAGGAATTGTACTTCTTGAATAGTTTCAATGATTCTTGTCAAGAAATAACCTTACCTGCATTGGAAAGGTATCAACTCATTGATGATATTGGTGAAATGTACGATTTTTCACTTTCAAAATGTGTTTCTCTTCAATATGATTGTTTGTCAGAAGCTACAGTTAAGCATGTGATTCCAACAGCAGAGATTCTTAGATTGGAAGGAACTAAGAAGGGGTGGAGAAATCTCATGCCGGAAATTTACCAAATGTGTTTTCCAATTTAA 2187 0.3544 MEGISTDLGKTFVEKLINGVIGKSRYLFCYKCIANEFELEKEKLEAEWETMTLRFTKAKEKGKDIQSNAQFWEKQANKLIQENTKLKQRCFFGFCPDCIWLYKRGEELANKTEEIKKLMVKGEKLENVEVTRSLPDVERYSSQSYISFKTRESKYNELLNALKDDSYYTIGLHGMGGTGKTTMAKEVGKQLKTSMQFNRVIFTTVSSTPNIKKIQDDIAGHLELEWRDTNESTRPTQLWDRLINGEKILVILDDVWDYLNFEDIGIPNSDNHKGCKVLVTTRYLKVCNKMSCATTIQIELLSEEEAWEMFKRHAELSNISSKNILDQGSKIALECKGLPIAIATIARSLKGEKRQENWDAALNSLQNPMLMAGVDDTKVDIYKCLKFSYDNLKDKEAKELFLLCSIFQEDEEISTEILTRLGIGIGLFGEDYKKYNHARTLVVVAKDNLLDSCLLLSTNKRDVKMHDLIREVAQWIANKEILAVDFSNKTQKSLVGRDNNIKYLLFEGNPMDLCSSGFDGSKLKILIFIVDNGCFVDSFFKSIAGLLVLNLRAGKQSTISLPQSIRSLTNIHSLLIESVYLGDISVLGSLQSLETLDLNQCIIEELPQEIAKLKKLRLLNLEMCEIIDKNPFEVIQRCPSLEELYFLNSFNDSCQEITLPALERYQLIDDIGEMYDFSLSKCVSLQYDCLSEATVKHVIPTAEILRLEGTKKGWRNLMPEIYQMCFPI* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3674 728 Coils Coil 69 89 - -
Tpr3g3674 728 Gene3D - 300 414 IPR042197 -
Tpr3g3674 728 PRINTS Disease resistance protein signature 169 184 - -
Tpr3g3674 728 PRINTS Disease resistance protein signature 242 256 - -
Tpr3g3674 728 PRINTS Disease resistance protein signature 335 349 - -
Tpr3g3674 728 PRINTS Disease resistance protein signature 588 604 - -
Tpr3g3674 728 Gene3D - 99 298 IPR027417 -
Tpr3g3674 728 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 49 724 - -
Tpr3g3674 728 SUPERFAMILY L domain-like 464 662 - -
Tpr3g3674 728 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 404 IPR027417 -
Tpr3g3674 728 CDD AAA 149 281 - -
Tpr3g3674 728 Coils Coil 108 128 - -
Tpr3g3674 728 Gene3D Ribonuclease Inhibitor 458 725 IPR032675 -
Tpr3g3674 728 Coils Coil 34 54 - -
Tpr3g3674 728 PANTHER - 49 724 - -
Tpr3g3674 728 Pfam NB-ARC domain 152 391 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3674 Tpr-Chr3 40922784 40925070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3674 170 505 WRKY Transcription Factor Family AT5G45050 28.280 2.49e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3674 - - mtr:MTR_3g451650 865.529