Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3673 ATGGAGGGTTTCCTATTAGATGTGGGGAAGACATTTGTAGAGAAATGTATAATCGGTGCAATAGAAAAATCACGTTATCTATTTTGCTTCAAGTGCATTGCTAAGGAATTCAATGACGAAAAGGATAAGTTGGAAGCAGAAAGGAAAACTATGAGACAACGTTTTGAAGTGGCTATTGACAAAGATAAAGATATTCAATTTAATGCTCAATTTTGGGAAGAGCATGCTGAGAAGCTCATTCAAGAGGACACTAAGACAAAACAAAGATGTTTTTTTGGAATTTGTCCTGATTGCATATGGCAATATAAAAGGGGAGAGGAGTTGGCAAACAAGATAGAGGAAACTAAAAAATTGGTTGAAAAGGCAGAGAAACTTGAAAATATTGAACTCGCTCGTCGTCTACCAGATGTTGAGCGTTATTCTTCTCAATATTACATTTCTTTTAAAAGTAGGGAGTTGAGATACAAAGAGCTTTTGGATGCACTAAAAGATGACAGATACTATACAATTGGATTGCATGGGATGGGGGGCACAGGTAAAACTACATTGGCAAAAGAAGTGGGCAAACAACTTAAGGCTTCGATGCAATTCAATCGTGTTATCATTACTACAGTGTCAAATACTCCTAATATAAAAAAGATTCAAGATGATATCGCCGGACCCTTGGGATTGGTATGGGAGGACAACAATGAGTCAAACAGGCCTGAAAAGCTATGGAACCGATTAACCAATGGTGAGAAAATTCTTGTGATATTGGATGATGTGTGGGGATATCTCAATTTTGATGACATAGGGATTCCAAATAGTGATAATCACAAAGGATGCAAAGTTCTTGTAACCACACGATATTTGTGGGTATGCAACAAAATGGCATGTGGAATAACAATTCAACTAGAGCTCTTATCCGAAGAAGACGCATGGGCCATGTTCCAAAGGTATGCTGAGCTAAGTAATATTTCCTCCAAAGGTCTTCTCAAACAGGGACGCAAAATTTCACTTGAATGCAAAAGATTACCTGTTGCAATTTCTACCATCGCCAGCAGTTTGAAGGGACAAAAAGGTCGAGAAGAGTGGGATGTTGCCTTAAAGTCCTTACAAAGGCCAATGTCCATGGGTGATGTTGATGAAAATTTGGTTGACATTTATAAATGTTTGAAGTTTAGCTATGAAAATTTGAAGGACAAAACAGCCAAGGAATTGTTCCTCTTATGTTCTGTATTCCAAGAAGATGAAGTGATCTCTACTGAAATATTAACTAGACTTGGCATAGGAGTCGGCCTCTTTGGGCAAGGTTATGACAAATACAACGATGCTCGAAATCTAGTAGTTGTAGCCAAAAATAAACTCATTGATTCATGTTTACTCCTTGATTCATGTTCATTTTTTAAGACAAGAGATGTTAAAATGCATGACTTGATTCGTGAAGTAGCCCAATGGATTGCGAACCAAGAGATTCTAGTGGTAGATTCTTCTAACAAAAATCAAAAGTCATCATTGGCTGGAAGAGATAATATCAGATATTTGTTATTTGATGGAAATCCAATGGACTTGTGTTCCTCTAGGTTTGATGGTTCTAAACTTCAGATTCTGATTCTAATCATGGTCACAGCTGGCTTTGTGGATTCTTTCTTTGAAAATATTGCAGGGCTTCGAGTTTTGAATTTGATAGTAGATGAACAAGTTACTTTATCATTACCACAATCAATTCGGTCATTGACGAATATTCATTCTCTATTAATTAAAAGTGTCGATTTGGGTGACATCTCTGTTTTGGGAAGCCTGCAAAGTCTTGAGACACTTGATTTGAATCAATGTACAATTGAAGAACTTCCACAAGAAATTGCTAAATTGAAGAAACTTCGATTGTTGAACTTGGAAAAGTGTAAAATTATAGATAAGAATCCATTTGAAGTTATCCAAAGATGCCCATCACTTGAGGAATTGTACTTCAGGCTTAGTTTTAATAGTTTTTGTCAGGAAATAACCTTACCTGCATTGGAAAGGTATCAACTCATTGATGTTTTTAGTGATATGTACGATTTTTCACTATCAAAATATGTGTCTCTTCAACATAATTATTTGTCAGAAGCTACAGTTAAGCAAGTGATTCCAACAGCAGAGATTCTTGGATTGGAAGGAACTAAGAAGGGGTGGAGAAATCTCATGCCGGAAATTGTTCCTATGGATCAAGGTATGAATGATCTAATTGAGCTTCGTTTGACAGATTTTTCACAACTAGAGTGCCTCATAGACACTAAACATATTGGTTCTCCAGTACCAAATGTGTTTTCCAATTTAAAGGAGCTGACACTAAAATCATGCTCAACATTGGTTTTTGTTTTTGATTTGTCAACTTCTCAAAGTCTGTTGCAGCTAGAAAGGTTGGTAATATGGGATTGTGAGCAATTGAAAAACATAGTTACTAATGAAAGGAAATCAGATGACAAGAGTTGCAACATATTGTTTCCAAAGCTGAAAGTTGTCGATATTGAGAGATGTCAGCAATTACAATTTATATTTCCACTTTTTTCTGTGGAAGACCTTTTGTTATTGGAAACTATCGAAATAGCAAGTTGTCGTAATCTGAAACACATATTTGGCCAACACCAAGATGTGGAACTTGCTTCACTGAAAACATTGCAGCTACGTTATGTGCCAAATTTCATCGGCATATTTCCAGAATCAAATGATTTATTTGAAGGGTCATCTCATTCCATTTCAAAGCCACAAACACAATTGGAGGTGGAGCCTATCAAATCCAATAAGTTCCCATGGAGTCATGTGTGTTGTTATGGATATAATAATAAATTGAGGGATAGCAGTAGCAGCACAAGTACTAAGATTCCAATCCCATCGGTATATGAGGATCAACCGCAACATTGCTCAATCTCATTGGTAACATTCTCTCATATATTTTTAATGTTAACTTTTGATATTTTTTCTTTTTTGACTAAAACTTTTGATACTTTTTCTTGTTAA 2979 0.3595 MEGFLLDVGKTFVEKCIIGAIEKSRYLFCFKCIAKEFNDEKDKLEAERKTMRQRFEVAIDKDKDIQFNAQFWEEHAEKLIQEDTKTKQRCFFGICPDCIWQYKRGEELANKIEETKKLVEKAEKLENIELARRLPDVERYSSQYYISFKSRELRYKELLDALKDDRYYTIGLHGMGGTGKTTLAKEVGKQLKASMQFNRVIITTVSNTPNIKKIQDDIAGPLGLVWEDNNESNRPEKLWNRLTNGEKILVILDDVWGYLNFDDIGIPNSDNHKGCKVLVTTRYLWVCNKMACGITIQLELLSEEDAWAMFQRYAELSNISSKGLLKQGRKISLECKRLPVAISTIASSLKGQKGREEWDVALKSLQRPMSMGDVDENLVDIYKCLKFSYENLKDKTAKELFLLCSVFQEDEVISTEILTRLGIGVGLFGQGYDKYNDARNLVVVAKNKLIDSCLLLDSCSFFKTRDVKMHDLIREVAQWIANQEILVVDSSNKNQKSSLAGRDNIRYLLFDGNPMDLCSSRFDGSKLQILILIMVTAGFVDSFFENIAGLRVLNLIVDEQVTLSLPQSIRSLTNIHSLLIKSVDLGDISVLGSLQSLETLDLNQCTIEELPQEIAKLKKLRLLNLEKCKIIDKNPFEVIQRCPSLEELYFRLSFNSFCQEITLPALERYQLIDVFSDMYDFSLSKYVSLQHNYLSEATVKQVIPTAEILGLEGTKKGWRNLMPEIVPMDQGMNDLIELRLTDFSQLECLIDTKHIGSPVPNVFSNLKELTLKSCSTLVFVFDLSTSQSLLQLERLVIWDCEQLKNIVTNERKSDDKSCNILFPKLKVVDIERCQQLQFIFPLFSVEDLLLLETIEIASCRNLKHIFGQHQDVELASLKTLQLRYVPNFIGIFPESNDLFEGSSHSISKPQTQLEVEPIKSNKFPWSHVCCYGYNNKLRDSSSSTSTKIPIPSVYEDQPQHCSISLVTFSHIFLMLTFDIFSFLTKTFDTFSC* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3673 992 Gene3D - 300 393 IPR042197 -
Tpr3g3673 992 PRINTS Disease resistance protein signature 169 184 - -
Tpr3g3673 992 PRINTS Disease resistance protein signature 242 256 - -
Tpr3g3673 992 PRINTS Disease resistance protein signature 335 349 - -
Tpr3g3673 992 PRINTS Disease resistance protein signature 592 608 - -
Tpr3g3673 992 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 404 IPR027417 -
Tpr3g3673 992 Pfam NB-ARC domain 161 391 IPR002182 GO:0043531
Tpr3g3673 992 Coils Coil 34 61 - -
Tpr3g3673 992 SUPERFAMILY L domain-like 468 893 - -
Tpr3g3673 992 Coils Coil 105 128 - -
Tpr3g3673 992 Gene3D Ribonuclease Inhibitor 477 897 IPR032675 -
Tpr3g3673 992 CDD AAA 151 281 - -
Tpr3g3673 992 PANTHER - 61 894 - -
Tpr3g3673 992 Gene3D - 122 296 IPR027417 -
Tpr3g3673 992 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 61 894 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3673 Tpr-Chr3 40873759 40890108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3673 170 635 WRKY Transcription Factor Family AT5G45050 23.519 1.02e-09 60.8