Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3668 ATGTCCTCTTCACCATCACCAATCTTCATCATCCTCATCACCATCCTCATCCATTTCCACCCCTCTTCCTCCACCTCATCATTCTCCCTCTCAGTAGAAAACCCAAAACAAAACACCATACTCTCACCCAACCAAACATTCACAGCAGGTTTTTACCCAGTAGGCCAAAATGCTTACACCTTTGCTATTTGGTTCACACATAAACACAAACACCTTAACAGCAACATCACAACCACCATTATTTGGATGGCGAATCGCGATGAACCGGTTAACGGTAAACACTCAACACTTTCCCTTCTTAAAACTGGTAACCTTGTCTTAACAGATGCAGCTCAATCCATTGTTTGGCAAACAAACACTGTCTCATCAAAACCATTAAAATTACTTTTACATGAAACTGGTAACCTTGTTCTTCAAGAACAAAACACAAACAGTTCAATCAATAACAATGTTATTATTCTTTGGCAAAGCTTTGATTTTCCAACAGATACACTTTTACCAGACCAACCCTTAACAAGATTCACCAATCTTGTTTCTTCAAGAAGCGAAACAAATTTTTCGTCGGGTTTTTATAAACTTTTCTTTGATAATGATAACATTTTGAGACTTCTTTATGAAGGTCCAAGTGTTTCAAGTATTTATTGGCCAGATCCTTGGACTACTAGCAATGGTGCTGTTGGTAGTGGTACAAGATCAACTTTCAACAGTAGTAGAATTGCTTTGTTGGATTCATTTGGTAGATTTAGTTCTTCTGATAATTTTGTTTATAATAATTCTGATTATGGAAGTTTTTTGCAACGTTTAATTAGACTTGATCATGATGGTAATGTTCGCATTTATAGTCGAAAAGATGAGGAACAAAGTTGGTTTGTTTCGGGTCAATTTCGTCAACAACCTTGTTTCATTCATGGGATTTGTGGACCCAATAGTACTTGTAGTAATGATCCATTAAATGGTAGAAAGTGTTCTTGTCTACCTGGTTATGTTTGGATTAATGATAAAGATAATAGTCAAGGTTGTAGACCCAATTTTCAGCTTTCTTGTAGTAACAAGAGTCATGATGAGTCAAGGTTTTTGGCTTTACCTCATGTTGATTTTTATGGATATGATTATGGATTCTTTCCTAATAAAACTTACAAAGAATGTGAGGATTTGTGCTTGAGTTTGTGTGGTTGTGCAGGATTTCAGTTTACTTTTAATGCTGATTATGGTGGTAATTTTTGGTGTTACCCGAAAATTCAGTTACTTAATGGCCATCATTCTCAGAGTTTTGTTGGATCATTCTACTTGAAATTGCCGAAAAGTAGTGGTTTTGTTGATGAGATTAGGATTCAAGAAAATGGAATGGGAATGGTTTGTGAGAGGAATGGAGTGGTAAAGCTTGAAAGAGATTACATGAAAAAGAAAGAAAATGGTTCATTGAAGTTCATGCTTTGGTTTGCTGGTGGTTTCGGAGGTGTTGAGCTTTTGGGATTTTTTCTGGTTTGGTTTTTCTTGTTTAGGAGTAGCAAAAATTCTGGTGAAGATCATCATGATTATGTTCTAGCAGCAACAGGGTTTAGGAAATTCAGTTACTCTGAATTGAAACAAGCTACAAAAGGTTTTAGTCAAGAGATTGGAAGGGGTGCTGGAGGATCTGTGTATAAGGGTGTTTTATCTGATAATCGAATCGCTGCGATAAAGCGTTTGCATGAAGCAAATCAAGGAGAGAGTGAGAGTGAGTTTCTTGCTGAAGTTAGCATCATTGGAAGGCTTAACCACATGAATTTGATTGGTATGTGGGGTTATTGTGCAGAAGGAAAGCATAGATTGTTGGTTTATGAGTACATGGAAAAGGGTACTTTAGCCGATAATCTCTCATCAAACGAACTTGATTGGGGTAAGAGGTATAACATTGCTATGGGAACCGCAAAGGGACTTGCTTATTTACACGAAGAGTGTTTGGAATGGATTTTGCACTGCGATATAAAACCTCAAAACATACTTGTTGACTCTGATTACCAACCCAAGGTAGCGGATTTTGGTCTCTCTAAACTGTTGAATAGGGATGACCTTGATAATTCAAATTTCTCAAGGATAAGAGGGACAAGAGGTTACATGGCACCGGAATGGGTTTTCAACTTGCAAATCACTTCTAAAGTCGATGTTTATAGTTACGGAGTTGTGGTGTTGGAGATGATTACTGGAAAGAGTCCAACAACAGGTATCCAAATCAAAGAAGAGTTGTGTCATGAGAGATTGGTAACATGGGTTAGGGAGAAAAAGAGAAAAGGATTAGAAGTTGGTTGTTGGGTGGAACAAATTGTTGATCCTAAACTGGGATCAAATTATGATGTAAAGAAAATGGAGACTCTGGCAAATGTGGCTTTGGATTGTGTAGCAGATGATAAAGATGTTAGACCCACCATGAGTCAAGTTGTTGAGAGGCTATTAAGTGATGAGCATAATTATTATTGA 2457 0.372 MSSSPSPIFIILITILIHFHPSSSTSSFSLSVENPKQNTILSPNQTFTAGFYPVGQNAYTFAIWFTHKHKHLNSNITTTIIWMANRDEPVNGKHSTLSLLKTGNLVLTDAAQSIVWQTNTVSSKPLKLLLHETGNLVLQEQNTNSSINNNVIILWQSFDFPTDTLLPDQPLTRFTNLVSSRSETNFSSGFYKLFFDNDNILRLLYEGPSVSSIYWPDPWTTSNGAVGSGTRSTFNSSRIALLDSFGRFSSSDNFVYNNSDYGSFLQRLIRLDHDGNVRIYSRKDEEQSWFVSGQFRQQPCFIHGICGPNSTCSNDPLNGRKCSCLPGYVWINDKDNSQGCRPNFQLSCSNKSHDESRFLALPHVDFYGYDYGFFPNKTYKECEDLCLSLCGCAGFQFTFNADYGGNFWCYPKIQLLNGHHSQSFVGSFYLKLPKSSGFVDEIRIQENGMGMVCERNGVVKLERDYMKKKENGSLKFMLWFAGGFGGVELLGFFLVWFFLFRSSKNSGEDHHDYVLAATGFRKFSYSELKQATKGFSQEIGRGAGGSVYKGVLSDNRIAAIKRLHEANQGESESEFLAEVSIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMEKGTLADNLSSNELDWGKRYNIAMGTAKGLAYLHEECLEWILHCDIKPQNILVDSDYQPKVADFGLSKLLNRDDLDNSNFSRIRGTRGYMAPEWVFNLQITSKVDVYSYGVVVLEMITGKSPTTGIQIKEELCHERLVTWVREKKRKGLEVGCWVEQIVDPKLGSNYDVKKMETLANVALDCVADDKDVRPTMSQVVERLLSDEHNYY* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3668 818 CDD B_lectin 38 161 IPR001480 -
Tpr3g3668 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 216 IPR036426 -
Tpr3g3668 818 Pfam Protein kinase domain 536 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3668 818 Gene3D Phosphorylase Kinase; domain 1 500 609 - -
Tpr3g3668 818 Gene3D - 30 159 IPR036426 -
Tpr3g3668 818 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3668 818 ProSiteProfiles Bulb-type lectin domain profile. 25 151 IPR001480 -
Tpr3g3668 818 SMART blect_4 31 161 IPR001480 -
Tpr3g3668 818 SUPERFAMILY Protein kinase-like (PK-like) 512 810 IPR011009 -
Tpr3g3668 818 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 9 816 - -
Tpr3g3668 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Tpr3g3668 818 Gene3D Transferase(Phosphotransferase) domain 1 610 817 - -
Tpr3g3668 818 Pfam S-locus glycoprotein domain 262 329 IPR000858 GO:0048544
Tpr3g3668 818 CDD STKc_IRAK 539 810 - -
Tpr3g3668 818 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Tpr3g3668 818 CDD PAN_AP_plant 344 433 - -
Tpr3g3668 818 SMART serkin_6 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3668 818 Pfam D-mannose binding lectin 79 172 IPR001480 -
Tpr3g3668 818 PIRSF SRK 2 817 IPR024171 GO:0004674
Tpr3g3668 818 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3668 Tpr-Chr3 40830217 40833101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3668 523 810 Trihelix Transcription Factor Family AT5G38560 43.345 1.63e-67 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr3g3668 Pkinase 1.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3668 - - gmx:100806357 1056.97