Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3659 ATGGCTGAAAACGGCGAAGAGAAATTACTCGCTGTGGCGCGCCACATAGCAAAAACGTTAGGCCAAACCAACAACATGGCCGATGATATTCTTCAAATATTCTCAAACTTCGACGGTAGATTTTCTAAGGAGAAACTTTCTGATGAAGGTGTAGGGAATGATACCGTACGCTGCGCTGCACTTGAACAAACTGTAAATTCTCTTGACCGTCAGATTTCAGATCATCTTTCGTCGGAAAATTCTGTTTGTTGCAACTCCACCGCGTTTCTCTCCACCGTTGACGAGCTCGTTTCGACGATTGAAGATTGGAGTCCTCTCTCCGATGATAAGGTTGTCGGAGCGTGTTTACAACGCGCTGATGATATTCTTCAACAGGCTATGTTTCGTGCGGAGGAAGAGTTTCGGTCACTTATGGAAATCGGAGGTGAATCGTTTGATGTGACGCGGAACAGCGACGAGTTGACTCAGAACGGTAGTTCGTTGTATGATTCGAATGGTGAGGAAGATGAAGAAGAAGAAATTGACGGTGATGAGTATGTGATTCCTGTGGCGAAGGCGGTTGTTGATTACAATGTTGTGATTGATGCGCTACCTCCGGCGACGGTTAACGATCTCCGGGAAATAGCGAAACGGATGATTGCGGCGGGGTTTGGGAAGGAGTGCTCGCATGTTTACGGTGGTTGTAGGAGGGAGTTTTTGGAGGAGAGTTTGTCGAGGTTAGGGTTACAGAAATTGAGCATTTCGGAGGTTCACAAGATGCCATGGCAAGAGCTTGAAGACGAGATTGAACGATGGATTAAGGCTTCGAATGTCGCTCTCAAAATCCTCTTCCCGAGTGAGCGGCGTCTCTGCGATCGCGTCTTCTCCGGTTTGTCTTCGTCATCGGCAGCTGCTGATCTTTCCTTCATGGAAGTCTGTCGTGGAGCAGTGATTCAGTTGCTGAATTTTGCCGATGCTGTAGCCATAGGTAGTCGCTCGCCGGAACGTTTGTTTAGAGTCCTCGATGTGTTTGAGACTATGCGTGACCTAATTCCTGAATTTGAATCGTTGTTCTCTGATCAGTATTGCTCGTTCCTTGTTAACGAAGCGATCACGATTTGGAAGAGGTTAGGAGAAGCTATTAGAGGAATTTTCATTGAATTGGAGAATCTGATTAGTCGTGATCCGGTGAAGGCGATTGTTCCCGGAGGAGGTCTTCATCCAATCACTCGTTACGTGATGAACTACCTCCGCGCTGTGTGCCGGTCGTACCAAACCCTAGAACTTGTTTTTCAAGACAATGCACTTACTTTGAAGGATTACCCTAAGCATGATGATAGGTTACAATCAAATTCTTCATTTTCTGTTCAAATTTCATGGGTTATGGACTTGTTAGAACGAAATTTGGAAGCAAAGTCTAAAATTTACAAAGACCCGGCTTTGTGCTCTGTTTTTATGATGAATAATGGGAGATACATTGTTCAGAAGACTAAAGACAGTGAATTAGGAACGCTTTTGGGTGATGATTGGATCAGAAAACACACTGCCAAAATTCGGCAATGCCATATGAACTATCAAAGAAGCTCGTGGAACAAGTTGTTTGGGTTACTGAAGGTGGAGACAATGGCTGCAAAACCCATGAAGGAGAAACTAAAGATGTTCAATCTGCATTTTGAAGAAATATGTAGAGTTCAATCTCAGTGGTTTGTCTTTGATGAGCAACTCAGGGAAGAATTAAGGATCTCCATCGAAAAGATCTTGTTGCCTGCATATGGAAGCTTTATTGGAAGGTTTCGAATTGTTCCAGAGCTTGCAAAGAATAGTGATAAGTATATCAAGTTTGGAATAGAGGATGTTGAAGCTCGGCTTACCACTTTGTTTCAAGGAAGCAGCGGATCAAATGGTGTCCGAAAATGA 1896 0.442 MAENGEEKLLAVARHIAKTLGQTNNMADDILQIFSNFDGRFSKEKLSDEGVGNDTVRCAALEQTVNSLDRQISDHLSSENSVCCNSTAFLSTVDELVSTIEDWSPLSDDKVVGACLQRADDILQQAMFRAEEEFRSLMEIGGESFDVTRNSDELTQNGSSLYDSNGEEDEEEEIDGDEYVIPVAKAVVDYNVVIDALPPATVNDLREIAKRMIAAGFGKECSHVYGGCRREFLEESLSRLGLQKLSISEVHKMPWQELEDEIERWIKASNVALKILFPSERRLCDRVFSGLSSSSAAADLSFMEVCRGAVIQLLNFADAVAIGSRSPERLFRVLDVFETMRDLIPEFESLFSDQYCSFLVNEAITIWKRLGEAIRGIFIELENLISRDPVKAIVPGGGLHPITRYVMNYLRAVCRSYQTLELVFQDNALTLKDYPKHDDRLQSNSSFSVQISWVMDLLERNLEAKSKIYKDPALCSVFMMNNGRYIVQKTKDSELGTLLGDDWIRKHTAKIRQCHMNYQRSSWNKLFGLLKVETMAAKPMKEKLKMFNLHFEEICRVQSQWFVFDEQLREELRISIEKILLPAYGSFIGRFRIVPELAKNSDKYIKFGIEDVEARLTTLFQGSSGSNGVRK* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3659 631 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 621 - -
Tpr3g3659 631 SUPERFAMILY Cullin repeat-like 85 620 IPR016159 -
Tpr3g3659 631 Pfam Exo70 exocyst complex subunit 263 617 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr3g3659 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 621 IPR004140 GO:0000145|GO:0006887
Tpr3g3659 631 Gene3D Exocyst complex component Exo70 68 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3659 Tpr-Chr3 40721653 40724024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3659 1 624 EXO70 exocyst subunit family AT5G58430 66.825 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3659 K07195 - gmx:100803694 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3659 3 40721653 40724024 Tpr3g3659 3 40721653 40724024 ECH