Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3654 ATGACCTCTTCATTTTTTTCTGACCTACTTAATTCTCCAACCGATCAAAACCTTAGAGACACCGAAAGATCTCATAATAATCAAGTGTTGTCGGATCAAAACGGGTCGGGTTTGCCCAAATTCAAATCTACACCTCCTCCATCTCTTCCTCTTTCTCCTGCACCTCTCTTTTCTCCTTCTTCTTACTTTTCTATCCCTCCTGGCTTCTCCCTCTCTGAGCTTCTTGATTCTCCTGTTCTCCTTAATTCTTCTCATATTCTTCCATCTCCAACAACTGGATCATTTGCTAATAATCAAGCTCTTAATTGGAAAAGCAATTATGGTGAAAAGCAGCAGAATGTGAAAGCAGAAGATAAAACCTTCTCAAATTTCTCCTTCCAAGCTCAACCTGCGCTTAATCAATCTTCAGCCGCCACAGCTCAAAACAATAATGGATGGAGTATGGTGAAAACAGAAAACTCTTCTTCAATGCAGAGTTTCAAACCAGAGAATAATTCTACTAGTGAACAAAATAATCACAAAAGAGGTTTACAATCAGATAATTACAACAATTATCAAACTCAACCACAACAACAACAAGTTCAAACACTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAAAAACAAGTAAAAGGAAGTGAAAATCCAAGAAGCTATTATAAATGCACTTATCCAAATTGTCCAACAAAGAAAAAAGTTGAAAAGAGAGCTATAGATGGACAAATTACTGAGATTGTTTATAAAGGTACTCATAATCATCCTAAGCCTTTGGCTAATAAAAGGAACATGAATTCAATGTCTTCATCGTCGTCGTCTGTTGCAAATCCTCCTTCAAATGGTTTTGAAAATGAAATGCAAATGGTTTTGGTTACTACACCGGAGAATTCGTCCATATCGATTGGAGATGATGATTTTGAGCAGAGTTCTCATAAATCAGGTGGAGATCATGAGTTTGGTGATGATGATCAACCCGATGCCAAAAAATGGAGAATTGAAGGTGAAAATGAGGGGATATCATCAGGAGTTGGAAATAGAACAGTGAGGGAACCTAGAGTTGTGGTTCAGACAACAAGTGACATTGATATTCTAGATGATGGGTATAGATGGAGAAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGAGTTACTATAAGTGTACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCTTCACAAGATCTAAGAGCAGTAATAACAACCTATGAAGGAAAACACAATCATGATGTTCCGGCGCCACGTGGCAGTGGAAACCACTCTATAAACAAACCACAACCAAATATGCCAACTATAAACAACACCAACAATGGATTCTTCAACCATGAGATGATGCAAAACAATGGATTTCCAATGGATTCTTACATGAATAATATGAATCAACGTGTTAATAATATTGTTAGAGGTAGAGCTAAGGATGAGCCTCTTGAAGATAACTCTTTTTTTGATTCTTTGCTATCTTGA 1512 0.3724 MTSSFFSDLLNSPTDQNLRDTERSHNNQVLSDQNGSGLPKFKSTPPPSLPLSPAPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNQALNWKSNYGEKQQNVKAEDKTFSNFSFQAQPALNQSSAATAQNNNGWSMVKTENSSSMQSFKPENNSTSEQNNHKRGLQSDNYNNYQTQPQQQQVQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVEKRAIDGQITEIVYKGTHNHPKPLANKRNMNSMSSSSSSVANPPSNGFENEMQMVLVTTPENSSISIGDDDFEQSSHKSGGDHEFGDDDQPDAKKWRIEGENEGISSGVGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPQPNMPTINNTNNGFFNHEMMQNNGFPMDSYMNNMNQRVNNIVRGRAKDEPLEDNSFFDSLLS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3654 503 ProSiteProfiles WRKY domain profile. 363 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 ProSiteProfiles WRKY domain profile. 202 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 SUPERFAMILY WRKY DNA-binding domain 360 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 SMART WRKY_cls 368 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 SMART WRKY_cls 201 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 MobiDBLite consensus disorder prediction 27 41 - -
Tpr3g3654 503 Pfam WRKY DNA -binding domain 369 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 Pfam WRKY DNA -binding domain 202 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 Gene3D WRKY domain 355 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 27 488 - -
Tpr3g3654 503 SUPERFAMILY WRKY DNA-binding domain 200 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 MobiDBLite consensus disorder prediction 309 328 - -
Tpr3g3654 503 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 27 488 IPR044810 GO:0003700
Tpr3g3654 503 Gene3D WRKY domain 187 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g3654 503 MobiDBLite consensus disorder prediction 151 173 - -
Tpr3g3654 503 MobiDBLite consensus disorder prediction 1 49 - -
Tpr3g3654 503 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3654 Tpr-Chr3 40635240 40640614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3654 38 502 WRKY Transcription Factor Family AT2G38470 46.365 4.78e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g3654 WRKY 5.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3654 K13424 - gmx:100127421 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3654 3 40635240 40640614 Tpr3g3654 3 40635240 40640614 ECH
Tpr3g3654 3 40635240 40640614 Tpr4g2816 4 31737032 31741114 PCT