Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3648 ATGGCTTATGAGAAAGTTACCCTAAACCTTAAAATGAAAGATGTTGAGCTTGTAAAACCATCAAAGTTCACTCCTCCTTGTATTCTTTCTCTTTCTACACTTGATAATAGAGGCATCTATAATAACCATTGCCACACTGTTCATGTATATCGATCATCAGAAACTCGTGATTCTGATTCGAGTATCGACTTTTGTCAAGTATTCAAAGAAGCACTCTCAAAGGCTTTGTTCTATTATTATCCTCTTGCAGGTAGACTAGTGAACCATGCTGATGATGGAAAACTTAGAGTCAATTGCAACCCTAATGCAGAAAACTATGGTGTTCCATTCTTGGAAGCAATTGCTAATTGCACCCTTTCTTCTATTAATTACTTGGACAATACTAACACAGAAATTGCAAAGCATTTGGTGCTTATTCCTCAAGATTTAAGTTATCCTTTAGTATTCAAGGTGACAAAATTTCTGTGTGGGGGTTTTACAATCGGAATGGGGGTGTTGCACGCCGTTTGCGATGGATTTGGTGCATCTCAATTCTTCAACACAATTGTTGAACTTGCAAGGGGAAGAATTGAGCCCTCGGTGATACCGGTATGGGAAAGAGAGAGACTAGTTGGATCAATAACTAAACAACCATTTCCATTATTCCCCATGCGCAAAGAATCTATTGCATTTTCGCCGTTTTTGAATCAAACCAATAGTACAAATATTAAGCAATATTGTTTTAAAGTCGAGGGTGAAATGATAACAAAGCTTAAGTTGAGTTTGATGAAGGAAAGTGAAAATGAAAATATAAGGTTCACAACTTTTGAATCACTTGCAGCTTATATTTGGAGATCAAGAGCAAGAGCCTTAAAACTTAACAACAATGGCGATACAATGTTGACTGTGTTAGTTGGTATGCGACGCAACTTGAAGGATTTCGATCCAATACCAAAAGGGTTTTATGGTAATTCGGTTATGGAAGCAAACATTGTGTTAAAAGTGAGTGATCTCAATGAAATGTCACTCTATGAAATTGTTAAGCTGATCAAAGAAGCTAAAAATGTTGCTTCGACGGCTGATTATGTCAAAAACACGATCGACTCTTTGGAGACGAATTTTAAGGATCGTGTTAACATGGAAAAAAGTACTGGTGCGGTAACGGTTTTGACAGAGTGGAAGCATTTGGGTTTTATGGGAGAAAATGTAGATTTTGGAGGGAATGAAATAGTAAATTTAGTACCAGCACCATGCAACTTGTTTGCATCTGTGGAAATGAGTGTTTTGTCATCTTCTAATAAATTTGATGATGTTGTTCCATCAATGAAAGGAGGAGTTAATCTTTTCACATCATTACCTGTTGCTGCTATGCCTAAGTTCAAGGAAGAAATTGAAGCTTTAAGATCTCTTAGTTGA 1395 0.367 MAYEKVTLNLKMKDVELVKPSKFTPPCILSLSTLDNRGIYNNHCHTVHVYRSSETRDSDSSIDFCQVFKEALSKALFYYYPLAGRLVNHADDGKLRVNCNPNAENYGVPFLEAIANCTLSSINYLDNTNTEIAKHLVLIPQDLSYPLVFKVTKFLCGGFTIGMGVLHAVCDGFGASQFFNTIVELARGRIEPSVIPVWERERLVGSITKQPFPLFPMRKESIAFSPFLNQTNSTNIKQYCFKVEGEMITKLKLSLMKESENENIRFTTFESLAAYIWRSRARALKLNNNGDTMLTVLVGMRRNLKDFDPIPKGFYGNSVMEANIVLKVSDLNEMSLYEIVKLIKEAKNVASTADYVKNTIDSLETNFKDRVNMEKSTGAVTVLTEWKHLGFMGENVDFGGNEIVNLVPAPCNLFASVEMSVLSSSNKFDDVVPSMKGGVNLFTSLPVAAMPKFKEEIEALRSLS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3648 464 PANTHER ACYL TRANSFERASE 4 6 461 - -
Tpr3g3648 464 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 461 - -
Tpr3g3648 464 Pfam Transferase family 11 459 - -
Tpr3g3648 464 Gene3D - 5 213 IPR023213 -
Tpr3g3648 464 Gene3D - 228 457 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3648 Tpr-Chr3 40561595 40563784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3648 8 364 Monolignol Biosynthesis Gene Families AT5G48930 28.997 1.04e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3648 K20240 - gmx:100801843 419.853