Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3646 ATGGCAAATCGTGACCAACCGGTAAATGGAAAACGCTCGAAACTTTCCCTTCTTAAAACAGGCAACGTCATCTTAACCGACGCAGACTATTTCATCGTTTGGTCAACAAACACTAACTCATCAAAACCACTTGACTTGTTTTTGTATGACACAGGAAATCTGGTTCTCAGAGAGCACACCACAAATGGTTTCATTTTGTGGCAAAGTTTTGATTACCCAACAGATACCCTCCTTCCTGAACAAAGTTTCACAAGGTACATGAACCTTGTTTCCTCCAAAAGTGACAATAAATATTCCTCTGGCTACTACAAACTCATTTTTGACAACGACAATGTTCTTCGCCTTCTATATGATGGCCCTCAAGTTTCCAGTATTTACTGGCCATATCCTTGGCTTGTGAGTTGGGATGCAGGTAGATCCACATACAATAGTAGTAGGGAAGCAAAATTAGACATTTGGGGGAACTTTAGCTCTTCCGATGATTTCACTTTAACGACAAGTGATTATGGAACAATTCTCCAACGAAGATTGACCCTTGATTCCGATGGTAATGTTCGTGCTTATAGCCGAAAACATGGACATGAGAAGTGGTTGATTTCAGGGCAATTCCACCAACAACTTATCAAAATACATGGAATTTGTGGACCAAATAGCATTTGCATTACCAATCCAAGAACCGGTAGAAAGTGTTTGTGTATTCCTGGTTATAGAAGGATTGATATTCAAGATTGGTCACAAGGGTGCAAACCCAACTTCCAACTTTCATGCAACAACAAAACCAAGTTAGAGACTCGATTCCAACGATTACACCATGTTCATTTTTATGGATACGATTATGACTACCGAGCAAATTATACTTATAAACAATGTAAGCATTATTGCATGCGGATGTGCCAATGCATAGCCTTCGAATATCGTTTCGTGAAAGACCAAGAGATGCCTTACTGCTATCCTAAGTCACAATTACAAAATGGGTTCAGTTCACCAAATTTTGAAGGATCAATCTTCTTGCGATTGCCAAAAGGAAAACAAGTTTTTTTCAATGAGAATGATATAAAAAATGGTAGCTTGGTTTGTTCTAGAAATAATGGAGTAAAACAACTAAGAAGACCATACATCGAAGGCAAAGAAAATGGACCAATGAAGTTCATGTTTTGGTTTACGATTGGTTTGGGGTTAATTGAGGCATTGTGCTTCTTTATGATATGGTGCTTCTTATTTAAGAACAGGAAACCCTCTGTTAGAGACAATCAAGGCTATGTTTTTGCAGGAACCATAGGATTTCGAAAATTCACTTACTCTGAACTAAAACAAGCAACAAAATGTTTTAGTCAAGAGATTGGAAAGGGTGCTGGAGGAACTGTGTATAAAGGTTTATTATCTAATAATCGTGTTGTGGCTATAAAGCGGCTACACGAAGCAAACAAAGGAGAGAGAGAATTCCTTGCTGAAATTAGCATCATTGGAAGGCTAAATCACATGAATTTGATTGGTATGTGGGGTTATTGTGCAGAGGGAAAACACAGATTGCTGGTTTTTGAGTACATGGAAAAGGGTTCTTTAGCTGATACTTTGTCATCAAATGCACTTGATTGGGCTAAGAGGTATCAAATTGCTGTTGGAACTGCAAAATGTCTTGCATATATACACGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCCCAAAACATACTAATTGACTCTGATTACCAACCCAAGGTAGCCGATTTTGGGTTGTCTAAGCTACTACAAAGGAACAATCGTGATAATTCAGGTTTTTCGAGGATGAGAGGAACAAGAGGTTACATGGCACCTGAATGGATTTTCAACTTGCCAATTACTTCCAAGGTGGATGTTTATAGTTATGGAGTTGTGGTGCTAGAGATGATTACCGGAAAGAGTGCAATGATTAGTATCCAAATCACAGATGGAGAAGAGTCTCACAACGAGAGTTTAGTAACATGGGTGAGAGAGAAAAGAAGGAAAGTATCAGACATGAGATCTTTTGTGGAACATATATTAGACCCTACATTGGGATCAAATTATGACATGGTTAAATTGGAGACTTTAGCAGCGGTTGCTTTGGACTGTGTTGAGGAAGAGAAAGACATGAGACCCAACATGAGTCAAGTTGTTGAGAGGCTCCAAATTCATGAACACGATTCTTGA 2178 0.3861 MANRDQPVNGKRSKLSLLKTGNVILTDADYFIVWSTNTNSSKPLDLFLYDTGNLVLREHTTNGFILWQSFDYPTDTLLPEQSFTRYMNLVSSKSDNKYSSGYYKLIFDNDNVLRLLYDGPQVSSIYWPYPWLVSWDAGRSTYNSSREAKLDIWGNFSSSDDFTLTTSDYGTILQRRLTLDSDGNVRAYSRKHGHEKWLISGQFHQQLIKIHGICGPNSICITNPRTGRKCLCIPGYRRIDIQDWSQGCKPNFQLSCNNKTKLETRFQRLHHVHFYGYDYDYRANYTYKQCKHYCMRMCQCIAFEYRFVKDQEMPYCYPKSQLQNGFSSPNFEGSIFLRLPKGKQVFFNENDIKNGSLVCSRNNGVKQLRRPYIEGKENGPMKFMFWFTIGLGLIEALCFFMIWCFLFKNRKPSVRDNQGYVFAGTIGFRKFTYSELKQATKCFSQEIGKGAGGTVYKGLLSNNRVVAIKRLHEANKGEREFLAEISIIGRLNHMNLIGMWGYCAEGKHRLLVFEYMEKGSLADTLSSNALDWAKRYQIAVGTAKCLAYIHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLQRNNRDNSGFSRMRGTRGYMAPEWIFNLPITSKVDVYSYGVVVLEMITGKSAMISIQITDGEESHNESLVTWVREKRRKVSDMRSFVEHILDPTLGSNYDMVKLETLAAVALDCVEEEKDMRPNMSQVVERLQIHEHDS* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3646 725 CDD STKc_IRAK 447 719 - -
Tpr3g3646 725 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 725 - -
Tpr3g3646 725 Pfam S-locus glycoprotein domain 158 238 IPR000858 GO:0048544
Tpr3g3646 725 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 128 IPR036426 -
Tpr3g3646 725 Pfam Protein kinase domain 444 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3646 725 ProSiteProfiles Protein kinase domain profile. 441 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3646 725 PIRSF SRK 1 724 IPR024171 GO:0004674
Tpr3g3646 725 Gene3D Phosphorylase Kinase; domain 1 409 515 - -
Tpr3g3646 725 SMART serkin_6 441 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3646 725 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 725 - -
Tpr3g3646 725 Gene3D Transferase(Phosphotransferase) domain 1 516 725 - -
Tpr3g3646 725 ProSiteProfiles Bulb-type lectin domain profile. 1 69 IPR001480 -
Tpr3g3646 725 ProSitePatterns Protein kinases ATP-binding region signature. 447 469 IPR017441 GO:0005524
Tpr3g3646 725 Pfam D-mannose binding lectin 2 85 IPR001480 -
Tpr3g3646 725 Gene3D - 1 86 IPR036426 -
Tpr3g3646 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Tpr3g3646 725 SUPERFAMILY Protein kinase-like (PK-like) 422 721 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3646 Tpr-Chr3 40520585 40523385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3646 431 719 Trihelix Transcription Factor Family AT4G32710 43.581 1.09e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr3g3646 Pkinase 2.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3646 - - gmx:100806357 985.711