Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3645 ATGGCTTATCAAAAAGCCCTCTTAAAACTTGAAATCAAAGATATTGTTCTTGTAAAACCAACAAAATCCACCCCTTCTTGTTTACTTTCTCTCTCAACAATTGACAATAAAGCCTACAATGATGAAATATGCCAAACCATTCATGTATACCGATCATCAATTCATAATTCTCCTAATAATAGTTTCAACCCTTCTCATTTGATTAAACAAGCACTCTCAAAATCTTTGTTTTATTATTATCCTCTTGCAGGTAGACTAATGAAACATGCCGATGATGGAAAGCTTAGAGTCAAGTGCAATCCTAATGAAGAAAATTACGGTGTTCCGGTCTTGGAAGCAAATGCTAAATGCACCCTCTCTTCTCTTCATTACTTGGACAACACTGACACCGATATTGCGAAACATTTGATGCTTGATCTTCCTTCTCCTCACGATAAAACTTACCCTTTGGTGTTAATGGTCACAAAATTTCTTTGCGGAGGTTTCACCATTGGAATGGGAGTGTCACATGCACTTTGTGATGGATTTGGTGGATCTCAATTCTTCAAATCAATTGTTGAACTTGCAAGCGGAAGAATCGAGCCATCAGTGAAACCTGTGTGGGAAAGAGAGAGACTAGTTGGTTCGATAACTAAACAGCCGTTTCAATCTCTCATCGATAAAGATTTAGCTGCATTTTCGCCTTTTCTTGAACCGAAAACAATTATTAAACAATATTGTTTTAAGATTGAAAGTGATGTGATAAAAAGACTCAAGATGAGTTTGATGAAAGAAAGTGAAAGTCATTCTAATATCACAACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAAAGCAAGAGCGTTAAAACTTAGTCCCAATGGAAAAACAGTGTTGATTATGGAAGTTGGTATGAGAGGCAAAAACCTAAAGGATTATGAATATACACTTCCTGAAGGGTATTATGGGAATGCTATTGTTGATGCAGATCTTGTGTTAAATGTTAATGAGCTTAATGAAAAACCACTCTCTGAGATTGTTAAGCTCATTAAAGAGACTAAAAATGTTGCTTCCACAATTGATTATGTGAGAAAATCGATCGATACTATGGAGACGATAAGACAGGAGGAAGAAGAAGAGGAGGAAGATTTGAACATTGATGATGCAATAATGTATGTGACAGATTGGAAGCATTTAGGTTTCATGGAAAGTGTAGATTTTGAAGGCTATGAATTAGTGAATTTAGTGCCAGCACCATGCAACTTGTTTAAGTGTCTTGATACATGCATTTTCATGTAG 1281 0.3591 MAYQKALLKLEIKDIVLVKPTKSTPSCLLSLSTIDNKAYNDEICQTIHVYRSSIHNSPNNSFNPSHLIKQALSKSLFYYYPLAGRLMKHADDGKLRVKCNPNEENYGVPVLEANAKCTLSSLHYLDNTDTDIAKHLMLDLPSPHDKTYPLVLMVTKFLCGGFTIGMGVSHALCDGFGGSQFFKSIVELASGRIEPSVKPVWERERLVGSITKQPFQSLIDKDLAAFSPFLEPKTIIKQYCFKIESDVIKRLKMSLMKESESHSNITTFESLAAYVWRSKARALKLSPNGKTVLIMEVGMRGKNLKDYEYTLPEGYYGNAIVDADLVLNVNELNEKPLSEIVKLIKETKNVASTIDYVRKSIDTMETIRQEEEEEEEDLNIDDAIMYVTDWKHLGFMESVDFEGYELVNLVPAPCNLFKCLDTCIFM* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3645 426 Gene3D - 230 426 IPR023213 -
Tpr3g3645 426 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 426 - -
Tpr3g3645 426 Gene3D - 5 216 IPR023213 -
Tpr3g3645 426 PANTHER ACYL TRANSFERASE 4 6 426 - -
Tpr3g3645 426 Coils Coil 361 381 - -
Tpr3g3645 426 Pfam Transferase family 9 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3645 Tpr-Chr3 40515879 40517548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3645 8 415 Monolignol Biosynthesis Gene Families AT5G48930 27.570 2.53e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3645 K20240 - gmx:100783730 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3645 3 40515879 40517548 Tpr3g3645 3 40515879 40517548 ECH