LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr3g3643	ATGGCAAATCGTGACCAACCGGTAAATGGAAAACGCTCGACACTTTCCCTTCTTAAAACAGGCAACGTCATCTTAACCAACGCAGACTATTTCATCGTTTGGTCAACAAACACTAACTCATCAAAACCACTTGACTTGTTTTTGTATGACACAGGAAATCTCGTTCTCAGAGAGCACACCACAAATGGTTTCATTTTGTGGCAAAGTTTTGATTACCCAACAGATACCCTCCTTCCTGAACAAAGTTTCACAAGGTACATGAACCTTGTTTCCTCCAAAAGTGACAATAAATATTCCTCTGGCTACTACAAACTCATTTTTGACAACGACAATGTTCTTCGCCTTCTATATGATGGCCCTCAAGTTTCCAGTATTTACTGGCCATATCCTTGGCTTGTGAGTTGGGATGCAGGTAGATCCACATACAATAGTAGTAGGGAAGCAAAATTAGACGTTTGGGGGAACTTTAGCTCTTCCGATGATTTCACTTTAACGACAAGTGATTATGGAACAATTCTTCAACGAAGATTGACCCTTGATTCTGATGGTAATGTTCGTGCTTATAGCCGAAAACATGGACATGAGAAGTGGTTGATTTCAGGGCAATTCCACCAACAACTTATCAAAATACATGGAATTTGTGGACCAAATAGCATTTGCATTACCAATCCAAGAACCGGTAGAAAGTGTTTGTGTATTCCTGGTTATAGAAGGATTGATATTCAAGATTGGTCACAAGGGTGCAAACCCAACTTCCAACTTTCATGCAACAACAAAACCAAGTTAGAGACTCGATTCCAACGATTACACCATGTTCATTTTTATGGATACGATTATGACTACCGAGCAAATTATACTTATAAACAATGTAAGCATTATTGCATGCGGATGTGCCAATGCATAGCCTTCGAATATCGTTTCGTGAATGACCAAGAGATGCCTTACTGCTATCCTAAGTCACAATTACAAAATGGGTTCAGTTCACCAAATTTTGAAGGATCAATCTTCTTGCGATTGCCAAAAGGAAAACAAGTTTTTTTCCACGAGAATGATATAAAAAATGGTAGCTTGATTTGTTCGAGAAATAATGGATTAAAACAACTAAGAAGACCATACATCGAAGGCAAAGAAAATGAACCAATGAAGTTCATGTTTTGGTTTACGATTGGTTTGGGGTTAATTGAGGCATTGTGCTTCTTTATGATATGGTGCTTCTTATTTAAGAACAGGAAACCCTCTGTTATAGACAATCAAGGCTATGTTTTTGCAGGAACCATAGGATTTCGAAAATTCACTTACTCTGAACTAAAACAAGCAACAAAATGTTTTAGTCAAGAGATTGGAAAGGGTGCTGGAGGAACTGTGTATAAAGGTTTATTATCTAATAATCGTGTTGTGGCTATAAAGCGGCTACACGAAGCAAACAAAGGAGAGAGAGAATTCCTTGCTGAAATTAGCATCATTGGAAGGCTAAATCACATGAATTTGATTGGTATGTGGGGGTATTGTGCGGAGCGAAAACACAGATTGCTGGTTTTTGAGTACATGGAAAAGGGTTCTTTAGCTGATACTTTGTCATCAAATGCACTTGATTGGGCTAAGAGGTATCAAATTGCTGTTGGAACTGCAAAATGTCTTGCATATATACACGAAGAATGTTTGGAGTGGATTTTGCATTGTGATATAAAGCCCCAAAACATACTAATTGACTCTGATTACCAACCCAAGGTAGCCGATTTTGGGTTGTCTAAGCTACTACAAAGGAACAATCGTGATAATTCAGGTTTTTCGAGGATGAGAGGAACAAGAGGTTACATGGCACCTGAATGGATTTTCAACTTGCCAATTACTTCCAAGGTGGATGTTTATAGTTATGGAGTTGTGGTGCTAGAGATGATTACCGGAAAGAGTGCAATGATTAGTATCCAAATCACAGATGGAGAAGAGTCTCACAACGAGAGTTTAGTAACATGGGTGAGAGAGAAAAGAAGGAAAGTATCAGACATGAGATCTTTTGTGGAACATATATTAGACCCTACATTGGGATCAAATTATGACATGGTTAAATTGGAGACTTTAGCAGCGGTTGCTTTGGACTGTGTTGAGGAAGAGAAAGACATGAGACCCAACATGAGTCAAGTTGTTGAGAGGCTCCAAATTCATGAACACGATTCTTGA	2178	0.3861	MANRDQPVNGKRSTLSLLKTGNVILTNADYFIVWSTNTNSSKPLDLFLYDTGNLVLREHTTNGFILWQSFDYPTDTLLPEQSFTRYMNLVSSKSDNKYSSGYYKLIFDNDNVLRLLYDGPQVSSIYWPYPWLVSWDAGRSTYNSSREAKLDVWGNFSSSDDFTLTTSDYGTILQRRLTLDSDGNVRAYSRKHGHEKWLISGQFHQQLIKIHGICGPNSICITNPRTGRKCLCIPGYRRIDIQDWSQGCKPNFQLSCNNKTKLETRFQRLHHVHFYGYDYDYRANYTYKQCKHYCMRMCQCIAFEYRFVNDQEMPYCYPKSQLQNGFSSPNFEGSIFLRLPKGKQVFFHENDIKNGSLICSRNNGLKQLRRPYIEGKENEPMKFMFWFTIGLGLIEALCFFMIWCFLFKNRKPSVIDNQGYVFAGTIGFRKFTYSELKQATKCFSQEIGKGAGGTVYKGLLSNNRVVAIKRLHEANKGEREFLAEISIIGRLNHMNLIGMWGYCAERKHRLLVFEYMEKGSLADTLSSNALDWAKRYQIAVGTAKCLAYIHEECLEWILHCDIKPQNILIDSDYQPKVADFGLSKLLQRNNRDNSGFSRMRGTRGYMAPEWIFNLPITSKVDVYSYGVVVLEMITGKSAMISIQITDGEESHNESLVTWVREKRRKVSDMRSFVEHILDPTLGSNYDMVKLETLAAVALDCVEEEKDMRPNMSQVVERLQIHEHDS*	726

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr3g3643	725	CDD	STKc_IRAK	447	719	-	-
	Tpr3g3643	725	ProSiteProfiles	Bulb-type lectin domain profile.	1	69	IPR001480	-
	Tpr3g3643	725	Gene3D	-	72	198	IPR036426	-
	Tpr3g3643	725	ProSiteProfiles	Protein kinase domain profile.	441	725	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr3g3643	725	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	1	725	-	-
	Tpr3g3643	725	Pfam	S-locus glycoprotein domain	158	238	IPR000858	GO:0048544
	Tpr3g3643	725	Gene3D	Phosphorylase Kinase; domain 1	414	515	-	-
	Tpr3g3643	725	Gene3D	-	1	71	IPR036426	-
	Tpr3g3643	725	SUPERFAMILY	Protein kinase-like (PK-like)	423	721	IPR011009	-
	Tpr3g3643	725	SUPERFAMILY	alpha-D-mannose-specific plant lectins	1	128	IPR036426	-
	Tpr3g3643	725	SMART	serkin_6	441	720	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Tpr3g3643	725	PIRSF	SRK	1	724	IPR024171	GO:0004674
	Tpr3g3643	725	PANTHER	SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN	1	725	-	-
	Tpr3g3643	725	Gene3D	Transferase(Phosphotransferase) domain 1	516	725	-	-
	Tpr3g3643	725	Pfam	D-mannose binding lectin	2	85	IPR001480	-
	Tpr3g3643	725	ProSitePatterns	Protein kinases ATP-binding region signature.	447	469	IPR017441	GO:0005524
	Tpr3g3643	725	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	557	569	IPR008271	GO:0004672\|GO:0006468
	Tpr3g3643	725	Pfam	Protein kinase domain	444	716	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr3g3643	Tpr-Chr3	40499540	40503486	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr3g3643	431	722	Trihelix Transcription Factor Family	AT5G38560	40.268	1.83e-62	219

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Tpr3g3643		Pkinase	1.5e-53	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr3g3643	-		-	gmx:100806357	978.393