Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3642 ATGGCTTATCAAAAAGCCCTCTTAAAACTTGAAATCAAAGATATTGTTCTTGTAAAACCAACAAAATCCACCCCTTCTTGTTTACTTTCTCTCTCAACAATTGACAATAAAGCCTACAATGATGAAATATGCCAAACCATTCATGTATACCGATCATCAATTCATAATTCTCCTAATAATAGTTTCAACCCTTCTCATTTGATTAAACAAGCACTCTCAAAATCTTTGTTTTATTATTATCCTCTTGCAGGTAGACTAGTGAAACATGCCGATGATGGAAAGCTTAGAGTCAAGTGCAATCCTAATGAAGAAAATTACGGTGTTCCGGTCTTGGAAGCAAATGCTAAATGCACCCTCTCTTCTCTTCATTACTTGGACAACACTGACACCGATATTGCGAAACATTTGATGCTTGATCTTCCTTCTCCTCACGATAAAACTTACCCTTTGGTGTTAATGGTGACGAAATTTCTTTGCGGAGGTTTCACCATTGGAATGGGAGTGTCACATGCACTTTGTGATGGATTTGGTGGATCTCAATTCTTCAAATCAATTGTTGAACTTGCAAGTGGAAGAATCGAGCCATCGGTGAAACCTGTGTGGGAAAGAGAGAGACTAGTTGGTTCGATAACTAAACAATCGTTTCAATCTCTCATCGATAAAGATTTAGCTGCATTTTCGCCTTTTCTTCAACCGAAAACAATTATTAAACAATATTGTTTTAAGATTGAAAGTGATGTGATAAAAAGACTCAAGATGAGTTTGATGAAAGAAAGTGAAAGTCATTCTAATATCACAACTTTTGAATCACTTGCTGCTTATGTGTGGAGATCAAAAGCAAGAGCGTTAAAACTTAGTCCCAATGGAAAAACAGTGTTGATTATGGAAGTTGGTATGAGAGGCAAAAACCTAAAGGATTATGAATATACACTTCCTGAAGGGTATTATGGGAATGCTATTGTTGATGCAGATCTTGTGTTAAATGTTAATGAGCTTAATGAAAAACCACTCTCTGAGATTGTTAAGCTCATTAAAGAGACTAAAAATGTTGCTTCCACAATTGATTATGTGAGAAAATCGATCGATACTATGGAGACGATAAGACAGGAGGAAGAAGAAGAGGAGGAAGATTTGAACATTGATGATGCAATAATGTATGTGACAGATTGGAAGCATTTAGGTTTCATGGAAAGTGTAGATTTTGAAGGCTATGAATTAAGCCTCCTAAAATCTGGAGACGCCCCTGGTCTTGATACATGCATTTTCATGTCTCAAAATAAAATTGATGATCCAATATTAGGTGAAGGAGTTAGGATTTTTATATCCCTTCCTGTTGCTGCCATGCCTAAGTTTAAGGAAGAAATTGATGCTCTCAGATTTCTCTGA 1386 0.3615 MAYQKALLKLEIKDIVLVKPTKSTPSCLLSLSTIDNKAYNDEICQTIHVYRSSIHNSPNNSFNPSHLIKQALSKSLFYYYPLAGRLVKHADDGKLRVKCNPNEENYGVPVLEANAKCTLSSLHYLDNTDTDIAKHLMLDLPSPHDKTYPLVLMVTKFLCGGFTIGMGVSHALCDGFGGSQFFKSIVELASGRIEPSVKPVWERERLVGSITKQSFQSLIDKDLAAFSPFLQPKTIIKQYCFKIESDVIKRLKMSLMKESESHSNITTFESLAAYVWRSKARALKLSPNGKTVLIMEVGMRGKNLKDYEYTLPEGYYGNAIVDADLVLNVNELNEKPLSEIVKLIKETKNVASTIDYVRKSIDTMETIRQEEEEEEEDLNIDDAIMYVTDWKHLGFMESVDFEGYELSLLKSGDAPGLDTCIFMSQNKIDDPILGEGVRIFISLPVAAMPKFKEEIDALRFL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3642 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 6 459 - -
Tpr3g3642 461 Gene3D - 230 455 IPR023213 -
Tpr3g3642 461 Gene3D - 5 216 IPR023213 -
Tpr3g3642 461 Coils Coil 361 381 - -
Tpr3g3642 461 PANTHER ACYL TRANSFERASE 4 6 459 - -
Tpr3g3642 461 Pfam Transferase family 9 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3642 Tpr-Chr3 40493926 40496201 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3642 8 408 Monolignol Biosynthesis Gene Families AT5G48930 27.078 1.55e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3642 K20240 - gmx:100783730 426.787