Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3640 ATGCCTTCTTCAACTCTTCAATGGCTAAGCCTAGTTGGTATCATTTGGCTCCAAGCTATAAATGGAACAAACTCAAACTTCCCTGCTTACTCTTCCCAACTAAAACAGCTTCTTTCCATTTCTCAAATTCAGCTCAATAACCTTGCTTTTGCATCTGATGCCGGCAAACTTTTCGGTTGGTTTTCCGGCCTTGCAACTATTTACCTTCCCCTCTGGCTCGTCCTCACCATCGGTTCATTTCTCGGACTAATCGGTTATGGTGTGCAATATCTCTTCATAACCAACCAAATTTCTTCTCTATCATATTGGCATGTGTTCTTACTAACTTTCCTTGCCGGGAATAGCATTTGTTGGATCAACACAGTCTGTTATGTCATTGCCATACGAAACTTTCTATCCGATCGCCAAGTTGCCATTGGATTAACAACTAGCTATCAAGGATTAAGTGCAAAGATTTATACCAATATTGTTGATGTTGTTTCTTCACACAATAAGGCTAAAACATTTCTTTTCTTTAACTCTTTTGTACCGGTTGTAGTTGGCTTTATAGTAGCTCCTCTAGTAAGAGAAATTGAAGTGAAAAATACTAAGCATTCTAGTGTTGGTTTTGCTTTGATGTTTGTTATTACAATTGCTACTGGAATATATGCTGTAATGAGTAGCTTGCAAATTTTCACAAACAAAATATCCTCACTCGGGGTGCTTATCGGTATTTTAGTATCTCTTTTCTTACCACTATTGCTTCCCATTTCTATGAAGATCAAGGAACTATTTGAATCATGTCATAAAAAAAGAGAAAGATTAAGAATATACCATTTTACTATGGAGGAGAATACTACATGTGAAGAGAGAATAGTGAATGAGGTGAAAGAAGGTGAAGATAGGTGTGAATTTGAAGAGGTTGGTGTAATGGAAGAAATTGGAGTGAAGTTAATGTTGAGAAGAATCAATTTCTGGTTATATTTCTTTGTCTACTTTTTTGGTGCAACAATTGGTTTAGTCTTTCTAAACAATTTGGGACAAATAGCTGAATCTAGAGGTTGCTCTGCTACTTCATCTTTGGTGTCTTTGTCTTCGTCTTTTGGATTCTTCGGCCGTCTCATTCCATCTCTTATGGACTATTTCTACAGGGGAAAACATACAATTTCAAGACCTACATTTATGGTATCAGTTATGGCACCAACAGCAGGTGCATTTTTCTTACTACTCAACAAAACTGATCTTTCCCTTTACATAAGCACTGCTGTTATTGGAATTTCTACTGGAGCAATCACTTCAACAGCTGTTTCCACAACAACTGAACTATTTGGAACAAAGAATTTCTCTGTAAATCATAATGTGGTTGTGGCAAATATTCCAATGGGATCCTTTTTGTTTGGTTACTCAGCTGCATTTATTTACCATAAGGAAGGAAATGAACATGGAAAATGCATGGGTATGGAATGTTATAGTAACACTTTTATCATTTGGGGTTCCTTTTGTTGCCTTGGAACTTTATTAGCTTTGATTCTACATTTTAGGACTCGTAAGTTTTACTCACAAAAACAATAG 1551 0.3643 MPSSTLQWLSLVGIIWLQAINGTNSNFPAYSSQLKQLLSISQIQLNNLAFASDAGKLFGWFSGLATIYLPLWLVLTIGSFLGLIGYGVQYLFITNQISSLSYWHVFLLTFLAGNSICWINTVCYVIAIRNFLSDRQVAIGLTTSYQGLSAKIYTNIVDVVSSHNKAKTFLFFNSFVPVVVGFIVAPLVREIEVKNTKHSSVGFALMFVITIATGIYAVMSSLQIFTNKISSLGVLIGILVSLFLPLLLPISMKIKELFESCHKKRERLRIYHFTMEENTTCEERIVNEVKEGEDRCEFEEVGVMEEIGVKLMLRRINFWLYFFVYFFGATIGLVFLNNLGQIAESRGCSATSSLVSLSSSFGFFGRLIPSLMDYFYRGKHTISRPTFMVSVMAPTAGAFFLLLNKTDLSLYISTAVIGISTGAITSTAVSTTTELFGTKNFSVNHNVVVANIPMGSFLFGYSAAFIYHKEGNEHGKCMGMECYSNTFIIWGSFCCLGTLLALILHFRTRKFYSQKQ* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3640 516 Pfam Nodulin-like 7 250 IPR010658 -
Tpr3g3640 516 SUPERFAMILY MFS general substrate transporter 7 510 IPR036259 -
Tpr3g3640 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 515 - -
Tpr3g3640 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3640 Tpr-Chr3 40470607 40476662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3640 1 515 Nodulin-like Gene Family AT2G30300 48.099 2.05e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3640 - - gmx:100800763 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3640 3 40470607 40476662 Tpr3g3640 3 40470607 40476662 ECH