Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3639 ATGGTTTCCAAAGTTCACAAGAGAACAGCCATATACAGGAGGAAACTACAACTGCTACGTTCAATCATATACTCCCCATCGCACAGTAAAACCTCAGTGATATTGGATGCAACAGAGTATATACAAGGATTAAAGCAAAAACTTGAAGAATTGAAACAGTTACCTGTTCCAACAACACAATCAATTGTTGATTATAATCCAATGCCTAAGCTTAAAGTTGAGACACAAGAAGAAGGCTTTGTGATCAAGGTTCATAGTGAAAGGAGTTGCCAAGGATTGCTAGTGTTCATCTTGGAAGCTTTCGAAGAACTTGGTCTTGAAGTACCCCATGCTAGGGTTTCTTGTGTTGATGACTTTTGTTTAGAAGCTATTGGGAACAAAGAGAACAATGAAGATACTAGTCCTTTGAGTGCACAATTAGTTGAAGAAGTGGTGTCTCAAGCTATTCAAAACTGGTGCAAGTTACAAAACATTAATGATTAA 483 0.3747 MVSKVHKRTAIYRRKLQLLRSIIYSPSHSKTSVILDATEYIQGLKQKLEELKQLPVPTTQSIVDYNPMPKLKVETQEEGFVIKVHSERSCQGLLVFILEAFEELGLEVPHARVSCVDDFCLEAIGNKENNEDTSPLSAQLVEEVVSQAIQNWCKLQNIND* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3639 160 PANTHER TRANSCRIPTION FACTOR BHLH93-LIKE PROTEIN 1 154 - -
Tpr3g3639 160 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 154 - -
Tpr3g3639 160 Coils Coil 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3639 Tpr-Chr3 40446040 40447923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3639 15 123 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.268 7.93e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3639 - - gmx:100527278 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3639 3 40446040 40447923 Tpr3g3639 3 40446040 40447923 ECH
Tpr3g3639 3 40446040 40447923 Tpr4g2321 4 24554748 24558549 ECH
Tpr6g1823 6 19635007 19638129 Tpr3g3639 3 40446040 40447923 ECH