Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3633 ATGGATAGTTCAAATAATATGGTGGATGATGAAGTTATGAAAGTTGACAACATTAATGACGATGACACGTGTTGGGACCCTGCAACAGGGATGTGTTTTTCTTGTTTAGATGAAGTTAAATCTTTTTATGGAGAATATGCTTTGAAAAAGGGTTTTCGGTGGAAGATTAGAACATCAAGAAAAGGATCAGACGGAGAAATATGCTACTTAATTCTAGCATGTTCAAGAGTGGGGTCTAATGTCTCAAAGGTTTCGTGTACATCGAAGACACTTCCGGAAAAGGTGAATAGTTGTCCTGCTAAGATTTGTGTGAAGATGGAAGAAAATGGATTGTGGTACATTAAAAAATTTGAACCTGACCATTCTCACGAGACCAGCCCTACAAAGGCAAAGTTGTTCAAGGCTAACAAGAAAATGAATTTGCATGTAAAGAGGACTATCCAAATCAATGATGATGTAGGAGTGAGGATTAACAAAGCTTTCCAATCTCCTGTTAAAGATGCAGGAGAGCATGGCAGTATACCATTTTGTGATAGAGACGTGAGGAATTATGTTAACAAGGAAAGGTGTGCAATTGGAAAAGAAGGTGGTGTTAAGGCATTGATAAGCTATTTTTGTCAAATGAGGGAACAACATTCAAATTTCTTCTACGACATAGATTTGGACGTAAAAAATGTGTTTTGGGCTGATGCAAGAAGCAGAGCTACTTATGAGTATTTTGGAGATGTTGTAACTTTAGACACAACATACTTGACAAATAAACACGACATGCTTTTTCTGGCATTTGTTGGTGTGAATCATCATGGTCAATCAACATTACTTGGATGTGGGCTGCTTTCAGGAGAAGACACGGAATCGTATGTATGGCTATTCAAATCTTGGCTTCGCTGTATGCTAGGAAAGGCCCCTATTGGTATTGTGACTGACCAATGTAAGACTATGCAAAATGCCATTGAGTTAGTCTTCCCTACAACACGCCATAGGTGGTGTTTATGGCATATAATGAAAAAAGTTCCCGAAAAGCTCAGCAGATATGATGAATATAAAAGGATCAAGTCTGCGATGAAAGAAGCAGTTTATGATACATACACAACAACTGATTTTGAAGAGAAATGGTGTTCCTTCATCGACAAATTTGAGCTTCAACATAATGATTGGTTGAGTGGGTTGTATAACGAGCGTCATAAATGGGCACCAACCTTCGTAAGAAAATATTTTTGGGCAGGTATGTCAACTACGCAACGAAGTGATAGCGTACATGCTTTCTTTGATGGATATATTGATTCAACAACAAGTCTAAATCAATTTGTAAAGCAATATGATAACGCTCTTAGAAGTAGAGCAATAGAAGAATCTGAAGCAGATTTTAATTCAATGGATACTACAATTCCGTGTGGGTCAAACTCTTCCATTGAAAAGCAATTCCAAGGTGAGTACACCCATGCCAAATTCAAGGAAGTTCAAGCTGAATTCAGATCTAAAATGAACTGTGCTGCCTCGTTGAATGTTCTGGAGGGTTGTTTTGCTACTTATCATGTGTTGGAGGAGGTGGTAGTTGGAGACATACCTAAAGAACGTGTCTTAAATGTTGTGTTTAATCAGGAAAGCCATGATTTCAACTGTGAATGCTCGTTGTTTGAGTTTAGAGGCATCTTGTGTTGCCATGTGTTATCTGTATGTGCTCAAGAGAGGATTAAAAATGTGCCAGAGAAATATGTTTTAACAAGATGGAATAAAAATATTAAAAGGAAGCATTCATTTATTAAGAGCAGTTATGATGGGACAGAATTGAAGCCGCAAATGGTTAGATTTGAAAAATTGTGCAAGCATTTCTATGATATTGCTGAAGTAGCCGCAAAGTCCGAAGATGGAACTAAGGCACTCCATGAAATGTTACGTCAGTTTAATTCTAATTTGCCCCCCATGGATGGTACAACTAACAAACACGAAACATACAATGAGATGAAATGA 1971 0.3765 MDSSNNMVDDEVMKVDNINDDDTCWDPATGMCFSCLDEVKSFYGEYALKKGFRWKIRTSRKGSDGEICYLILACSRVGSNVSKVSCTSKTLPEKVNSCPAKICVKMEENGLWYIKKFEPDHSHETSPTKAKLFKANKKMNLHVKRTIQINDDVGVRINKAFQSPVKDAGEHGSIPFCDRDVRNYVNKERCAIGKEGGVKALISYFCQMREQHSNFFYDIDLDVKNVFWADARSRATYEYFGDVVTLDTTYLTNKHDMLFLAFVGVNHHGQSTLLGCGLLSGEDTESYVWLFKSWLRCMLGKAPIGIVTDQCKTMQNAIELVFPTTRHRWCLWHIMKKVPEKLSRYDEYKRIKSAMKEAVYDTYTTTDFEEKWCSFIDKFELQHNDWLSGLYNERHKWAPTFVRKYFWAGMSTTQRSDSVHAFFDGYIDSTTSLNQFVKQYDNALRSRAIEESEADFNSMDTTIPCGSNSSIEKQFQGEYTHAKFKEVQAEFRSKMNCAASLNVLEGCFATYHVLEEVVVGDIPKERVLNVVFNQESHDFNCECSLFEFRGILCCHVLSVCAQERIKNVPEKYVLTRWNKNIKRKHSFIKSSYDGTELKPQMVRFEKLCKHFYDIAEVAAKSEDGTKALHEMLRQFNSNLPPMDGTTNKHETYNEMK* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3633 656 SMART 26again6 539 566 IPR006564 GO:0008270
Tpr3g3633 656 PANTHER OS03G0843700 PROTEIN 11 623 - -
Tpr3g3633 656 Pfam FAR1 DNA-binding domain 41 125 IPR004330 -
Tpr3g3633 656 ProSiteProfiles Zinc finger SWIM-type profile. 526 564 IPR007527 GO:0008270
Tpr3g3633 656 Pfam MULE transposase domain 243 337 IPR018289 -
Tpr3g3633 656 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 11 623 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3633 Tpr-Chr3 40393219 40398890 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g3633 MULE 7.5e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3633 - - gmx:102667848 748.814