Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3625 ATGGAAATTCTATCTTCTATTGTTGGAACAGTAGCAGAACATACTGTTGTGCCTATTAGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTCAGTATGCTAGCGGCTCATGTTAAAGAACTTGAGGCTGCAAAAGAAAGAATAACCCATTCCGTTGAAGAAGAACGGAGAAACGGTAAAAAGATTAAGAGAGATGTGATGAACTGGTTAGAGAAAGTGGATGAGGTCATTGAAAAGGCAAATCAGCTTCAAAACGATCCTCGTCGTGCCAACGCTAGGTGCTCAGCATGGTCGTTCCCCAATTTGATTTTGCGTCATCGACTAAGTAGGAAGGCCACAAAAATTGTTAAAGATTTTATTGAAGTTCAAGAAAAAGGGAAGTTTGATCGAATTGGTTACTATCCTACCCTAGATGGAAACGCCTCCTCCTCCTCCTCAAAAAGAGGTGGTGAAAATTATGAGACAAGGGAATTACTTAAAGAAAAAGGGATGTTTGATCGAATTGGTTACCGTCCTACCCTAAATGGAAAAGCACCCTCCTCCTCCTCAACAAGAGGTGGTGAAAATTATGAGACAAGGGAATCACTTAAAGAGAACATTATGAAGGCACTAACGCACCATAATTCATGCAACATTGGGGTCTATGGGTTGCCTGGGGTGGGTAAGACCACTCTGGTATATGAAGTTTGTCAAATATCTCGGCAACAGAAATTGTTTGATACAGTTGTTACAACGCATGTAACTAAAGATCCAGACATTAAAACAATTCAAGGGGAGATTGCAGATAGGTTGGGTCTACGATTCGTTGAGGAGACTATTTTTGGCAGAGCACATCGCCTGAGACAAAGAATCATGATGGAAAAAAATATCCTTGTCATTCTAGATGATATATGGACCCAACTTGATTTGAAAAAAGTTGGAATTCCATTTGGTAATGAACATAATGGTTGCAAGTTGTTGATGACATCTAGAAATCTAGATGTGTTGCTAGAAATGGATGTTCCAAAGGATTTCACTTTCAAACTTGAACCTATGAGTGAAAATGAGACATGGGAATTGTTTCAAATTATGGCTGGGGATGTCGTTAAAGATATCAATTTGCAAAGTTTAGCAAGTCAAGTTGCCAAACAATGTAGAGGTTTGCCTCTTCTAGTAGTGACGGTAGCTCGAGCAATGAAACATCAGAGGGATGTTCAATCTTGGAAAGATGCATTAAGGAGATTACAACATGATGTTCATCTTACAATTTTTTCTGCTTTGGAATTAAGTTACGACTCATTGAAAAGTGATGAAATGAGGGATGTCTTCTTGCTTTTTGCATTATTTCCAAACGAAAAGGTACATTACTTTCTAAAAGTTGCAATGGGTTTGGATATATTTAAGGGTATTAAGACCGTGTATGATGCTAGAAATAAACTTTATTCAATAATCCATTCTTTGGAGGCGACTTGTTTGATTGAAATTAAAACAAGTGGAAATATCCAAATGCGTGACTTTATTCGTGATTTTGCTATCTCCATAGCACGTAGGGACAAACATATATTTCTAAGAAAACAATCAGATGAGGAATGGCCACCCAACTATTTTTTAACAAGGTGCACGCAGGTTGTTCTAGATAGTTGTGTGTCCGAGCTTCCTCAAATGATTGACAGTCCAAACAATAAGTTTTTCTATTTGAGCAGTAAGAAGAACCGTTCTTTAGAAGTTCCTGATGATTTTTTTAAGGGTATGGGAAGCCTTAGAGTCCTAGATTTAACATTTCTGAACTTGACTTCATTACCTACTTCCTTTCGGTTCCTAACCGACCTTCAAACATTGTGTTTGAATTTTTGCATTTTGGAAAACATGGTTGAAATAAATGCATTGCAAAATTTAGTAATTCTTTGCCTTTTGGGTTCTTCAATCACCAAGTTGCCAAGAGAAATAGGGCAATTGACTCAATTAAGAATGCTTGACTTGAGCAAATCAGGAATAGAAGAAATTCCACCCAACATTTTATCAAGTTTGACTAAACTGGAGGAGTTGTACATGGGCAATACCTTTGTTAATTGGGAAGATGTGAGTTCAATGGTTCAAAACAAAAATGCTAGCATTGCTGAGCTTCGAAAACTACCCAACTTGACTACTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACATGCAGACGGTGTTTGAGAAGTTGGAAAGATATAAAATAGCTATTGGTGATGTATGGGAATGGCGTGACATTGTGAATGGAACCTCAAAAACATTGATGCTCAAACTTGGGACTAACATACATTTGGAGCACGGAATAAAGGCATTGATTAAGGGTGTTGAGAATTTGTACTTGGATGATGTAGGTGGAATTCAAAATGTGGTTTATCAACTAAATGTAGAAGGATTTCCGTTGCTGAAACATCTCCACGTCCAAAATAATGCAAACATGAAACATATTGTTGACTCTCAAGAGAGGAATCAAATCCATGTGTTCTTTCCCTCGTTGGAAACACTAGTACTTCATAATCTTAAAAACTTGGAGCATATATGGAATAAAATTTGGAATTACGATCATCATTCTATGTGCAACTTAACTAGCTTGATTGTGGAGAGTTGTGGTGGATTGAAGTACTTATTCTTGTCTACTATGGTTGGAAGTTTTAAGAACCTCAAACACCTTGAAATAAGTGATTGTCCTTTGATGGAGGAGATAATAGCCAAAGAAGAGAGAAACAATGAAATAGTAGAGGAATCAAATTCACATTGCCTTGATAACAAATGTGTTGGCTCAATGTTTCCAAAGCTAGAAGTTCTTAATATTGAGGGATGCCCCTTATTTGAATGTATATTTCCTTTCCTCTTTGTTCAAGACGTTCCAGTACTGCAAAAAATCAGAATTAGAAGATGTGATCGATTGAAATACATATTTGGCCAATACCAACATGAGGAATTTAGGTCACTGAAACAATTGGAGCTCTGTCAAATACCAAATTTCATTAATAATCTCATATCCTTGTCTGAGAAGGGGTCATCTTCCACTTCCAATCATGGTTCCAACAAGGCACAGTTACAATTGGATTTGGACCCTGTGAAATACAATATCTTCTCTTGGGATACCACAACTACTACAATCCCATTGCTTGATGGGCACTACTCAGAATCAAATTCATATTGCGTTAACATATGGGAGCGAGTTCAATGTCTTCAAATACCATCAAATATCCTTTACAATATTAAAAAGATGGAACTGTCTCAATTTTCCAAGATGGAATCGGTATTTATTCCATCTATTGCTTCAAGAATGTTGTTGGAAACTTTGACAATAAGGAACTGTGATGAATTGAAGAACATAATAGACTTTGGAGATTATGAAAGTGGTAGCAATAATTGGGGCGATGTCTTCCCAAATATGAAAGAGCTCTACATTGAAGATTGCCCAAAAATGGATTACATATTTGGACACGACACCAATGATCATCAAAACCACGTGGAGATTCAGCTTCAACTTCAACTTCTAGAGTTGAAATGTCTAAGTCTTTGCAATCTGCCAAGTTTAGTCGCCATGTGTCCCAAACATTATCGAATAAGATTTCCTCCTTTGGCGAAACTTGAACTCAACAAATGTTCCCCGGCTGCTATCAAATCTATGAGTAATTTCATAATTGATCCAGTTTCAGAATCTCTGAACAGTACAATCATAAAGGGTATCGAGATAATTGAAGAGGCTTCTACTTGA 3732 0.3714 MEILSSIVGTVAEHTVVPIRRQASYLIFYKGNFSMLAAHVKELEAAKERITHSVEEERRNGKKIKRDVMNWLEKVDEVIEKANQLQNDPRRANARCSAWSFPNLILRHRLSRKATKIVKDFIEVQEKGKFDRIGYYPTLDGNASSSSSKRGGENYETRELLKEKGMFDRIGYRPTLNGKAPSSSSTRGGENYETRESLKENIMKALTHHNSCNIGVYGLPGVGKTTLVYEVCQISRQQKLFDTVVTTHVTKDPDIKTIQGEIADRLGLRFVEETIFGRAHRLRQRIMMEKNILVILDDIWTQLDLKKVGIPFGNEHNGCKLLMTSRNLDVLLEMDVPKDFTFKLEPMSENETWELFQIMAGDVVKDINLQSLASQVAKQCRGLPLLVVTVARAMKHQRDVQSWKDALRRLQHDVHLTIFSALELSYDSLKSDEMRDVFLLFALFPNEKVHYFLKVAMGLDIFKGIKTVYDARNKLYSIIHSLEATCLIEIKTSGNIQMRDFIRDFAISIARRDKHIFLRKQSDEEWPPNYFLTRCTQVVLDSCVSELPQMIDSPNNKFFYLSSKKNRSLEVPDDFFKGMGSLRVLDLTFLNLTSLPTSFRFLTDLQTLCLNFCILENMVEINALQNLVILCLLGSSITKLPREIGQLTQLRMLDLSKSGIEEIPPNILSSLTKLEELYMGNTFVNWEDVSSMVQNKNASIAELRKLPNLTTLELQIRETWMLPRDMQTVFEKLERYKIAIGDVWEWRDIVNGTSKTLMLKLGTNIHLEHGIKALIKGVENLYLDDVGGIQNVVYQLNVEGFPLLKHLHVQNNANMKHIVDSQERNQIHVFFPSLETLVLHNLKNLEHIWNKIWNYDHHSMCNLTSLIVESCGGLKYLFLSTMVGSFKNLKHLEISDCPLMEEIIAKEERNNEIVEESNSHCLDNKCVGSMFPKLEVLNIEGCPLFECIFPFLFVQDVPVLQKIRIRRCDRLKYIFGQYQHEEFRSLKQLELCQIPNFINNLISLSEKGSSSTSNHGSNKAQLQLDLDPVKYNIFSWDTTTTTIPLLDGHYSESNSYCVNIWERVQCLQIPSNILYNIKKMELSQFSKMESVFIPSIASRMLLETLTIRNCDELKNIIDFGDYESGSNNWGDVFPNMKELYIEDCPKMDYIFGHDTNDHQNHVEIQLQLQLLELKCLSLCNLPSLVAMCPKHYRIRFPPLAKLELNKCSPAAIKSMSNFIIDPVSESLNSTIIKGIEIIEEAST* 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3625 1243 Gene3D - 347 430 IPR042197 -
Tpr3g3625 1243 PANTHER - 20 822 - -
Tpr3g3625 1243 PANTHER - 828 914 - -
Tpr3g3625 1243 MobiDBLite consensus disorder prediction 177 191 - -
Tpr3g3625 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 440 IPR027417 -
Tpr3g3625 1243 Gene3D Ribonuclease Inhibitor 522 732 IPR032675 -
Tpr3g3625 1243 Coils Coil 68 88 - -
Tpr3g3625 1243 SMART LRR_typ_2 647 670 IPR003591 -
Tpr3g3625 1243 SMART LRR_typ_2 579 601 IPR003591 -
Tpr3g3625 1243 Gene3D Ribonuclease Inhibitor 751 1022 IPR032675 -
Tpr3g3625 1243 Coils Coil 40 60 - -
Tpr3g3625 1243 Gene3D - 179 339 IPR027417 -
Tpr3g3625 1243 SUPERFAMILY L domain-like 541 995 - -
Tpr3g3625 1243 Pfam NB-ARC domain 196 415 IPR002182 GO:0043531
Tpr3g3625 1243 MobiDBLite consensus disorder prediction 173 193 - -
Tpr3g3625 1243 Coils Coil 393 413 - -
Tpr3g3625 1243 PRINTS Disease resistance protein signature 213 228 - -
Tpr3g3625 1243 PRINTS Disease resistance protein signature 286 300 - -
Tpr3g3625 1243 PRINTS Disease resistance protein signature 380 394 - -
Tpr3g3625 1243 PRINTS Disease resistance protein signature 645 661 - -
Tpr3g3625 1243 SMART AAA_5 210 346 IPR003593 -
Tpr3g3625 1243 CDD AAA 195 338 - -
Tpr3g3625 1243 PANTHER RPP4C3 828 914 - -
Tpr3g3625 1243 PANTHER RPP4C3 20 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3625 Tpr-Chr3 40272822 40292809 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3625 214 667 WRKY Transcription Factor Family AT5G45050 23.782 4.01e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3625 - - mtr:MTR_2g089975 1160.98