Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3618 ATGCCGGAGATCGAACAACCACCGGAAGTAACAGCCCTTTTCGGAAAATATGAATTGGGAAGAGTCGTTGGTTGCGGCGCGTTTGCGAAAGTTTACTACGCGCGTAACGTGAAAACAGGACAAAGCGTTGCTGTGAAAATCATCAACAAAAAGAAACTCTCCGGTACGGGTCTCGCCGGAAATGTGAAACGAGAAATCACAATTATGAGTCGTCTTCATCATCCTCACATTGTTCGTCTCCACGAAGTTCTCGCCACAAAGACGAAAATCTATTTTATTATGGATTTTGTTCGTGGTGGCGAGCTCTTCGCGAAGATTTCAAAGGGTCGGTTTAGTGAAGATCTTAGTCGGAGATATTTTCATCAATTAATCTCAGCCGTTGGTTATTGTCACTCGCGTGGCGTTTTTCATCGTGATCTTAAACCTGAGAATTTGTTATTAGATGAAAATGGGAATTTAAAAGTTTCGGATTTTGGGTTAAGTGCGGTTCGTGATCAAATCCGACCCGATGGGTTGCTCCATACACTTTGTGGGACACCTGCTTACGTGGCACCGGAGATTCTCGCTAAGCGAGGATATGATGGCGCGAAAGTCGATGTTTGGTCATGCGGCGTTGTTTTGTTTGTCCTTGCTGCTGGTTATCTTCCATTTAATGAGCAAAATTTAATGGTTATGTATAGAAAAATATATAAAGGTGAATTCCGGTGTCCGCGTTGGATGTCGACAGATCTTCGACGGTTTTTGTCGAAGTTGCTCGATACCAATCCGGACACTCGGATTACTGTTGATGGTATGACCCGGGATCCGTGGTTTAGGAAAGGGTATAAACAAATAAAATTCCATGAGGAAGATTATGGATCAGGGTACGAGTTAGGTGTCGGGTGTAAGGGTGATGGGTCGGAGGTATTGAATTTGAATGCATTTGATATTATATCATTTTCATCGGGTTTAGATTTATCCGGGTTGTTCGGAGAATTTGACGGGGTGGAGCGGTTTGTTCTACGGCAGTTGCCAGAGAAGATTTTGGAAGTGGTAGAGGAGGTTGGAGCGGCAGAGGGAATGGCATTGAGGTGGAAGAAGGAATGTGGGGTTGAGTTGGAAGGATTGAGTGGTAAATTTGGAATTGAGATTGAGGTTTACCGGTTAACGGTGGAGGTAGCGATGGTTGAGGTTAGGAGGAGAGGAAATGATGCGGCGGCGTTTTGTAAATTGTGGGATATTAAGCTTAAGCCTCAGTTACTACGGGGTGAGGCAACGACGTCGTATCAGCATGAATTTGATTCGCCGGTTTCTAGTGATTGA 1302 0.4455 MPEIEQPPEVTALFGKYELGRVVGCGAFAKVYYARNVKTGQSVAVKIINKKKLSGTGLAGNVKREITIMSRLHHPHIVRLHEVLATKTKIYFIMDFVRGGELFAKISKGRFSEDLSRRYFHQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILAKRGYDGAKVDVWSCGVVLFVLAAGYLPFNEQNLMVMYRKIYKGEFRCPRWMSTDLRRFLSKLLDTNPDTRITVDGMTRDPWFRKGYKQIKFHEEDYGSGYELGVGCKGDGSEVLNLNAFDIISFSSGLDLSGLFGEFDGVERFVLRQLPEKILEVVEEVGAAEGMALRWKKECGVELEGLSGKFGIEIEVYRLTVEVAMVEVRRRGNDAAAFCKLWDIKLKPQLLRGEATTSYQHEFDSPVSSD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3618 433 PANTHER - 1 427 - -
Tpr3g3618 433 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3618 433 CDD CIPK_C 306 413 - -
Tpr3g3618 433 Gene3D Transferase(Phosphotransferase) domain 1 8 290 - -
Tpr3g3618 433 Pfam NAF domain 304 356 IPR004041 GO:0007165
Tpr3g3618 433 Gene3D Kinase associated domain 1, KA1 301 415 - -
Tpr3g3618 433 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Tpr3g3618 433 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 427 - -
Tpr3g3618 433 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Tpr3g3618 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Tpr3g3618 433 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3618 433 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g3618 433 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3618 Tpr-Chr3 40204957 40206882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3618 1 421 CBL-interacting serine-threonine protein kinases AT2G30360 62.903 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr3g3618 Pkinase 7.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3618 - K12761 gmx:100799169 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3618 3 40204957 40206882 Tpr3g3618 3 40204957 40206882 ECH
Tpr3g3618 3 40204957 40206882 Tpr4g2854 4 32295153 32297388 PCT