Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3616 ATGGCGAGTTTCCTTACTGATTTGGTGAAGCCATATGTGGAGAAATTGATAAATGGGGCAATCACAGAATCAAGTTATATATGTTGCTTCACGTGCATTGCTAAGGATTTTGAAGATGAAAAAATTAGGTTGGAAGTAGAAAGGACAACTTTCGATCAACGCATTGATGTGGCAACTAGAAGAGGGGAAAATGTTCAAGCTAATGCTCTATTATGGAAAAAAGAAGTTGAAGAGCTCATTCAAGAAGACACCAAAACAAAACAAAATTGTTTTTTTGGATTTTGTTGTGACTGCATATGGCGATATAAAAGGGGAAAGGAACTAGCAAATAAGAAGGAGCAAATCAAAAAATTGATGGAAACTGGAAAGGAACTTGCAATTGGACTCCCTGCTTATCTTCCAGATATTGAACGTCATTCATCCCAACACTATATTCCTTTTGAAAGTAGGAAATCCAAATACAAAGAGCTTTTGGATGCATTGTATGATGACAACAATTATATAGTCGGGTTGCAAGGGATGGGGGGAACAGGAAAAACTACATTGGCCAAAGAAGTGGGCAAGGAACTTAAGCGGTCCAATCAATTTACTCATGTTATCGATACGACGGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATTGCTGGACCCTTGGGATTGAAATTTGATGACTGTAACGAATCAGATCGACCCAAAAAACTATGGAGCAGATTAACCAATGGTGAGAAGATTCTTATAATATTGGATGATGTGTGGGGAGATATCAATTTTGATGAAATAGGGATTCCACAAAGTGACAATCGCAAAGGCTGCCGTGTTTTTGTAACCACACGCAATCTGCAGGTGTGCAACAGACTAGGATGCAGTAGAACAATCCAACTAGATCTCTTATCTGAAGAGGATGCATGGATCATGTTCCAAAGGCATGCTGGTCTAAGCAAAGTTTCAACAAAAAATTTGCTTGACAGGGGCCGTAAAATTGTAAACGAATGCAAAAGGTTACCAATTGCAATTGCTGCTATCGCTAGTAGTTTAAAAGGCGAACAACGTCAGGAAAAGTGGGATGTGGCCTTAAATTCCTTGCAGAAGCATATGTCCATTCGCGGTGTTGATGAAGATTTGGTTGATATTTATAAATGTTTGAAGTTTAGCTATGATTATCTCAAGAACAAAAATGCCGAGGAATTGTTCCTCTTATGTTCTATATTCCAAGAAGATGCAGAAATCCGTACTCAAATTCTAACCAGACTTGGCATAGGAGTTGGCCTCTTTGGGGAAAGTTATGACAAATACAACAATGCTCGAAATCTAGTAGTTGTTGCAAAAGATAAACTACTTGATTCATGTTTACTGTTGAAGACAAATAAAGGAGATGTAAAAATGCATGACTTGGTTCGTGAAGTAGCCCAATGGATAGCGAACAAAGAGATTTTAGCAGTAAATGTTTCTAACAAAAATCAAAATTCATTGGTTGGAAGGAATAATATCAAATATTTGTTATTTGATGGCAGTCCAAATGATTTGTGTTCCCCTATGTTTGATGGTTCTAAACTAAGGATTCTGATTTTAATCATGGTCACAGGTTGCTTTGTGGATTCATTCTTTGAAAATATTGCAGGTCTTCGAGTTTTGAATTTAATAGCGGGTAAAAAAATTACTATATCATTGCCACAATCAATTCAGTCGTTGACAAATATTCGTTCTCTATTAGTGGAAAGTGCCGATTTGGGTGACATCTCTGTTTTGGGAAACCTGCAAAGTCTTGAGACACTTGATTTGAATCATTGTACAATTGATGAACTTCCTCAAGAAATTGCAAAGTTGAAGGAACTTAGATTGTTGAACTTGGAATACTGTAGAATTAAAAGTAATAATCCATTTGAAGTTATCCAGATATGCCCATCCCTTGAAGAATTGTACTTCTTTAAAAGTTTCAATGGTTTCTGTCAGGAAATAACCTTACCTACATTGGAAAGGTATCATCTCACTGATGTTTATGGTATAATTTGCGATTCTTCACTATCAAAATGTGTGATTCTTGAAAAGGATTATTTGTCAGAAGCAACATTTAAGCATGTGATGCAAACAGCAGAGCTTCTTAAGTTGGTAAGAATTAAGAAGGGATGGAGAAATATTATGCCTGAATTTGTTCCTATAGATCAAGGTATGAATGATCTAATTGAGCTTCATTTGAATGATGATTCACAACTACAGTTCCTCATAGACACTAAACATACTGGTTCTCAAGTACCAAATGTATTTTCCAAGTTGGTTGTACTAGAGCTCATCAAAATGAAAAATTTAGAAGAATTATGCAATGGTCCCATCTCCTTTGACTCTATGAACAATTTAGAGGAACTAACTATCAAGTCTTGCGGAAATTTGAGAAGTTTGTTCAAAGGCAATCTAAATCTCTGCAATCTAAAGACTGTGAAAATAGAAAGATGCTCCACATTAGTTTCTGTTTTTCATCTGTCAACTTCTGCAAGCCTGCCGTTGTTGGAAGAATTGAATATAAGTGAATGTGGTAACTTGGAAAACATATTTACATGTGAAAGGACGATTGAAGAAATATTAGTTCCAAAGCTTAAAGTTGTCAAAATAGAAAGTTGTAACAAGTTGACTTATATATTTGACCAAGAAGTCAAACTAACTTCACTTATAGAATTGAAGCTAGAATATGTGTCAAATTTCATCGACATATTTCCAAAATCATATAATTCCATTGAAGGGTCATCCTCATCCAATTCCATTTCAAAGCCACAAACACAATTGCAGGTGAAGCCATTGAAATCCAATATTATATTCTCTTGGAGTCATATATGTTGTTATAGATACAAGTTGAAGGGTGCCACAAGTACTAAAGTCCCATTGGTTTCTCAGGATCAGCCACAAGCCTGCTCAATCTCCACGGAAACAAGTTCATATTGTCCTAACATATGGAAACGTGCTCAATGTCTTTCAAGACTATCTCATATCATTTGCAATATTAAAAAGATAACACTGGCCAATGTTTCAAAGATAAAATCGGTGTTTATGTTGTCTATTGCACCAAAAATGTTGTTGGAGAGCTTGACTATATATTGTTGTTATGAATTGGAGCACATAGTAGTAGATTGTGGAGATTGCAGTGATGGAATTGAATTGGGCAATGTCTTCCCAAAATTAAAAGAACTCAATGTTGACTATTGTAGGAAATTGAAATACATATTTGGGCACATTAATGCTAGTGATGATCATGATCATAACAGCAATGAGATTCAACTTCATCTTCCAGCATTGAAAACTCTCAAGCTTGTTGATCTCAAAAGTTTAATCGGCATGTCGCCCAAACAATATCACATAACATTTTCACCTTTGAAAGAAGTTGAACTCAAAGAATGCTCTCAGGTTGATGTTAAATCTATTGGTGATTTTACCTTCCTTGCTTCAATTTCAAGATATCAGGACAGTACACCTATCAAGGAATTCAGTGGGAACATGGAACATCTTCTAGCTTTGGAAATGCTCAATGTATCTAAATCCAATGTAGAAAGTATATTATGTCTCAGTGAAGAAAGTGAGTGGCAGATAAACTTGGGGTTGCAAAACATTATTTTGCATAATCTACCTATGATGATATATCTTTTTATGGGTCCTAAAAATGCATTTGCCCTCAAAAACCTTAAAAGTATAACCATCTCTCAATGTGAAAAATTGGAAATAGTTTTCTCCACCTCTATTCTAAGATGCCTATCACAGTTGTCTCATCTAAGAATACAAGAATGCAATGAGTTGAAGCATATCATTGAAGATGATGATGATGATGATATTGAGAATCAAGGAATGTCAAAGACATACTTCCCAGTGCTAAAAACCCTTGCAGTAGCAATGTGCAATAAGTTGAAAAGTGTCTTTCCGATCTCCATGAAGAAAGAGCTTCCTCCTGAGTTAAAGGTTATGATGATAGGTGAAGCACATGAACTGAAAGAAATATTCAAAAGTGTAGGTGGTGATAATCAGAAAGTTGAGATTCCAAATCTGAAATCTGTAGTATTTGTCAACCTACCAAGCTTGTGCCATGTCCAGGGAATTCAATTTCAGGCCGTAGAAAACCATTGCATACAGAATTGTAAAGAATTGTCTCCGACATCGTTAACATCTAGCAGAAATTTCGGCAGGCACGCGTTTAGAATAGATGGCATAGATTTTGATGTGCATGTGAATCTGATTGGTCTATTTCAACAATTAGAAAACATGATGGCAGCATCTTCACAGAAAGAAATGAACCGAACACCAGAGACAAAGCATGAATTTATTGAAAATGTTCCTGATTTAGAGATACCATCAGTGACAACATTACCAACAAATTCCCAAGAGTTGACAAGTGAAGAATCAACAAGTCAACACTTACTTGAAGAAATTGATAATACCATCAAACTTTCTCAGTTGGAAGGTTCTATGTCTACCATTTCAGAAACAAGGAATGTGCCACCTATACATTTAGTTGATCTTAAACAAAAGGGTATTCAGGTAAGCGTTGAAGAAGGAACTGCATCAACTAGTTATGCCAACACAATAACATCATCAACTCATTTAGAATCAGAATATGGTGATGGCCAAATAGGCATACCTTTTCCAGTTTCAACTACAGATTGTCTTAACATCGCAGATGTTAATCTTGGAGACTCACACGAAACAACTCAAACTAACAATCAAGTTTCTCTAAATGATAATGCTGCCATGCAAGTAAGCTCAACTATTCAACAACAGTTTCATAAAGATGACGGAATAATAGTTTCTGGTTTAGAGATGCCATCAGCAGTATATTCACCAACAAACTCACAATTGGAGGGTTCTACATCAGAAAAAACAACAGAAGCAGCAACCATGTCTACTACTTCAGAACTAAAGAATGAGCCAGATGGTATGAAGATAAGTGTGGAAGATGGAACTACATCAGCTAATGCCAAGACAATAACATCATCAACTCATTCAAAATCAGTGAGTTCATCATCAGGTTTATCAACTACTTCTAAGTCGGAAACATCTTCACCGGAAGATGGAGATGGCAAAATATCCATACCCTCTTTTTCAACTGTCAATACAAAGCCTCCTGCCACCAAATATGTTGATATTGGAGACTCGCAGGAAATTATTGCAATGGAAGACATTAACATGCTGATCGAAGAAGACCCACTTCTTGCACTTCTTGCACTTGAGAAGCTTCTTACAGGACAATTCTCGAATTCCTCTGCTCGAGTTTTACTTCAAGAATTGAAGACTTTGATGGACTCATCATCAGACCTTGACCATCTTGTATCTAACCAAGAGTCTATTTCGAAATTGAATTCTCTTTTTCATCGATTGAATCAGTATCAAGGGATGTTAACTTCTGACTTGAAGGACTTTGTTGAGAAGGTTCAGAACTTCTTCAATGAAAACATTATCAGACACGCCACTGCTCAACAAGTACTCAAGAAGCACAACCAACTTCTTGATTCGAAAACTGATCTCATGAACAAGCTTTGGAGTGTAAAGAGTATACAAACCCACATTGATAGTGAAACTTCAACTACCAATGCTCAGATACATGGGCTCTCTTTACAAATTGATGAACTGACAAAAAAGTTGGCAGATCTTGAGAATCAAAGAGATAGTTTGAAGTCGGTGGCGAACAAATGTGATGTTCAGAAGATGAAGTTGAAGGCCGAATGCACAGAATTGGTCCAACAAAGTAAAAAATTCTTTTCTGCACTTGCTTCATCAGAGGTCGACCTAAGAGAAGCTGAGCATGCGAGGGATTTGGCAAAAGAAGGCTTTGCAAATTTAAAATCATCATTTCCTAGATTTTAG 5844 0.3624 MASFLTDLVKPYVEKLINGAITESSYICCFTCIAKDFEDEKIRLEVERTTFDQRIDVATRRGENVQANALLWKKEVEELIQEDTKTKQNCFFGFCCDCIWRYKRGKELANKKEQIKKLMETGKELAIGLPAYLPDIERHSSQHYIPFESRKSKYKELLDALYDDNNYIVGLQGMGGTGKTTLAKEVGKELKRSNQFTHVIDTTVSFSPDIKKIQDDIAGPLGLKFDDCNESDRPKKLWSRLTNGEKILIILDDVWGDINFDEIGIPQSDNRKGCRVFVTTRNLQVCNRLGCSRTIQLDLLSEEDAWIMFQRHAGLSKVSTKNLLDRGRKIVNECKRLPIAIAAIASSLKGEQRQEKWDVALNSLQKHMSIRGVDEDLVDIYKCLKFSYDYLKNKNAEELFLLCSIFQEDAEIRTQILTRLGIGVGLFGESYDKYNNARNLVVVAKDKLLDSCLLLKTNKGDVKMHDLVREVAQWIANKEILAVNVSNKNQNSLVGRNNIKYLLFDGSPNDLCSPMFDGSKLRILILIMVTGCFVDSFFENIAGLRVLNLIAGKKITISLPQSIQSLTNIRSLLVESADLGDISVLGNLQSLETLDLNHCTIDELPQEIAKLKELRLLNLEYCRIKSNNPFEVIQICPSLEELYFFKSFNGFCQEITLPTLERYHLTDVYGIICDSSLSKCVILEKDYLSEATFKHVMQTAELLKLVRIKKGWRNIMPEFVPIDQGMNDLIELHLNDDSQLQFLIDTKHTGSQVPNVFSKLVVLELIKMKNLEELCNGPISFDSMNNLEELTIKSCGNLRSLFKGNLNLCNLKTVKIERCSTLVSVFHLSTSASLPLLEELNISECGNLENIFTCERTIEEILVPKLKVVKIESCNKLTYIFDQEVKLTSLIELKLEYVSNFIDIFPKSYNSIEGSSSSNSISKPQTQLQVKPLKSNIIFSWSHICCYRYKLKGATSTKVPLVSQDQPQACSISTETSSYCPNIWKRAQCLSRLSHIICNIKKITLANVSKIKSVFMLSIAPKMLLESLTIYCCYELEHIVVDCGDCSDGIELGNVFPKLKELNVDYCRKLKYIFGHINASDDHDHNSNEIQLHLPALKTLKLVDLKSLIGMSPKQYHITFSPLKEVELKECSQVDVKSIGDFTFLASISRYQDSTPIKEFSGNMEHLLALEMLNVSKSNVESILCLSEESEWQINLGLQNIILHNLPMMIYLFMGPKNAFALKNLKSITISQCEKLEIVFSTSILRCLSQLSHLRIQECNELKHIIEDDDDDDIENQGMSKTYFPVLKTLAVAMCNKLKSVFPISMKKELPPELKVMMIGEAHELKEIFKSVGGDNQKVEIPNLKSVVFVNLPSLCHVQGIQFQAVENHCIQNCKELSPTSLTSSRNFGRHAFRIDGIDFDVHVNLIGLFQQLENMMAASSQKEMNRTPETKHEFIENVPDLEIPSVTTLPTNSQELTSEESTSQHLLEEIDNTIKLSQLEGSMSTISETRNVPPIHLVDLKQKGIQVSVEEGTASTSYANTITSSTHLESEYGDGQIGIPFPVSTTDCLNIADVNLGDSHETTQTNNQVSLNDNAAMQVSSTIQQQFHKDDGIIVSGLEMPSAVYSPTNSQLEGSTSEKTTEAATMSTTSELKNEPDGMKISVEDGTTSANAKTITSSTHSKSVSSSSGLSTTSKSETSSPEDGDGKISIPSFSTVNTKPPATKYVDIGDSQEIIAMEDINMLIEEDPLLALLALEKLLTGQFSNSSARVLLQELKTLMDSSSDLDHLVSNQESISKLNSLFHRLNQYQGMLTSDLKDFVEKVQNFFNENIIRHATAQQVLKKHNQLLDSKTDLMNKLWSVKSIQTHIDSETSTTNAQIHGLSLQIDELTKKLADLENQRDSLKSVANKCDVQKMKLKAECTELVQQSKKFFSALASSEVDLREAEHARDLAKEGFANLKSSFPRF* 1948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3616 1947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 402 IPR027417 -
Tpr3g3616 1947 PANTHER - 56 907 - -
Tpr3g3616 1947 PANTHER - 1222 1352 - -
Tpr3g3616 1947 Gene3D - 135 295 IPR027417 -
Tpr3g3616 1947 PRINTS Disease resistance protein signature 168 183 - -
Tpr3g3616 1947 PRINTS Disease resistance protein signature 241 255 - -
Tpr3g3616 1947 PRINTS Disease resistance protein signature 334 348 - -
Tpr3g3616 1947 PRINTS Disease resistance protein signature 586 602 - -
Tpr3g3616 1947 MobiDBLite consensus disorder prediction 1606 1695 - -
Tpr3g3616 1947 Gene3D - 387 474 IPR036388 -
Tpr3g3616 1947 SUPERFAMILY L domain-like 463 899 - -
Tpr3g3616 1947 SUPERFAMILY L domain-like 982 1360 - -
Tpr3g3616 1947 MobiDBLite consensus disorder prediction 1606 1636 - -
Tpr3g3616 1947 Coils Coil 1860 1894 - -
Tpr3g3616 1947 Gene3D Ribonuclease Inhibitor 704 851 IPR032675 -
Tpr3g3616 1947 Gene3D Ribonuclease Inhibitor 1119 1334 IPR032675 -
Tpr3g3616 1947 Gene3D - 300 386 IPR042197 -
Tpr3g3616 1947 MobiDBLite consensus disorder prediction 1645 1695 - -
Tpr3g3616 1947 Gene3D Ribonuclease Inhibitor 530 669 IPR032675 -
Tpr3g3616 1947 Pfam NB-ARC domain 155 389 IPR002182 GO:0043531
Tpr3g3616 1947 CDD AAA 154 280 - -
Tpr3g3616 1947 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 56 907 - -
Tpr3g3616 1947 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1222 1352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3616 Tpr-Chr3 40166436 40180251 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3616 169 642 WRKY Transcription Factor Family AT5G45050 23.818 1.63e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3616 - - mtr:MTR_3g062420 1692.17