Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3613 ATGGCGAGTTTCCTTACTGATTTGGTGAAGCCATATGTGGAGAAATTGATAAATGGGGCAATCACAGAATCAAGTTATATATGTTGTTTCACGTGCATTGCTAAGGATTTTGAAGATGAAAAAACTAGGTTTGAAGTAGAAAGGACAACTTTCAATCAACGCGTTGATGTGGCAACTAGAAGTGGGGAAAATGTTCAAGCTAATGCTCTTTTATGGAAAAAAGAAGCTGAAGAGCTCATTCAAGAAGACACCAAAACAAAACAAAATATTTTTTTTGGATTTTGTTGTGACTGCATATGGCGATATAGAAGGGGAAAGGAACTGGCAAATAAGAAGGAGCAAATAAAAATTTTGATAAAAACTGGAAAGGAACTTGCAATTGGACTCCCTGCTCATCTTCCAGATGTTGAACGTTATTCATCCCAACACTATATTCCCTTTGAAAGTAGGGAATCCAAATACAAAGAGCTTTTGGATGCACTGAACGATGACAAAAATTATATAGTCGGGTTGCAAGGGATGGGGGGCACAGGAAAAACTACATTGGCCAAAGAAGTGGGCAAGGAACTTAAGCGGTCCAATCAATTTACTCATGTTATCGATACGACAGTGTCATTTTCTCCTGATATTAAAAAGATTCAAGATGATATAGCTGGACCCTTGGGATTGAATTTTGATGACTGTAATGAATCAGATCGACCCAAAAAACTATGGAGAAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGATGATGTGTGGGGCGATATTGATTTTAATGATATAGGGATTCCACACATTGACTATCACAAGGGTTGTAGAGTTTTTGTAACTACGCGCTATCTGTGGGTGTGCAACAGACTAGAATGCAGTAAGACAATCCAACTTGATCTCTTATCCGAAGAAGACACATGGATCATGTTCCAAAGGCATGCTGGTCTAAGTGAAATTTCAACAAAAAATTTGCTCGACAAGGGCCGTAAAATTGCAAATGAATGTAAAAGATTACCAGTTGCAATTGCTGCTATTGCCAGTAGTTTGAAGGGCGAACAACGTCAGGAAAAGTGGGATGTGGCCTTAAATTCCTTGCAGAAACATATGGCCATAGGCGGTGTTGAATCTGTTGATAACGATTTGGTTGACACTTATAAATGTTTAAAGTTTAGCTATGATTATCTCAAGGACGAAAAGGCCAAGAAATTGTTCCTTTTATGTTCTGTATTCCCAGAAGATGAAGAAATCCCTACTTATATTCTAACCAGACTTGGCATAGGAGTCGGCCTATTTGAGGGAGGTTATGACAAATACAACAATGCTAGAAATCTATTAGTTGTAGCCAAAAATAAACTCCTCGATTCATGTTTACTGTTGAAGACAGATGAAGGAGATGTAAAAATGCATGACTTGGTTCGTGAAGTTGCCCAATGGATAGCGAACAAAGAGATTTTAGCAGTAAATTTTTCTAACAAAAATCAAAAGTCATTGGTTGGAAGGAATAATATCAAATACTTGTTATTTGATGGCAGTCCAAATGATTTGTGCCCCCCTATGTTTGATGGTTCTAAACTAAAGATTCTGATTTTAAGCATGGTCACAGGTTGCTTTGTGGATTCATTCTTTGAAAATATTGCAGGGCTTCGAGTTTTGATATTAATATACAGAGGTGAAGAAATAACTATATCATTACCACGATCAATTCGGTCATTGACTAATATTCGTTCTTTATTAGTTAAATGTGCGAATTTGGGTGACATCTCTGTTTTGGGAAACTTGCAAAGTCTTCAAACACTTGATTTGATCTTTTGTATGATTGACGAACTTCCACAAGAAATTTCAAACTTGAAGGGACTTAGATTGTTGAACTTGGAACTCTGTAGTATTGAAAATAATAATCCATTTGAAGTTATCCAGAGATGCCCATCCCTTGAAGAATTGTATTTCTGGAGTAGTTTCAATGATTTTTGTCAGGAAATAACCTTACCTACATCTACATTGGAAAGGTATCATCTCACTGATACAATTTCCGATTCTTCAGGATCAAAATGTGTGTCTCTTTATAATGATTATTTGTCAGAAGAAACATTTAAACATGTGATGCAAACAGCAGAGCATCTTAAGTTGAAAAGAATTAAGAAGGGATGGAGAAATATTATGCCTGAAATTGTTCCTATAGATCAAGGAATGAATGATCTAATTAAGCTTCATTTGAATGATGATTCACAACTACAGTTCCTCGTAGACACGAAACATATTGATTCTCAAGTACCAAATGTATTTTCCAAGTTAGTTGTACTAAAGCTCAATGAAATGGAAAATTTGGAAGAATTATGCAATGGTCCCATCTCCTTTGACTCTATGAACAATTTAGAGAAACTAACTATCAAGTCTTGTGGAAATTTGAGAAGTTTGTTCAAAGGCAATGTAAATCTCTGCAATCTAAAGACCGTGAAAATAGAAGCATGTCCCACATTAGTTTCTGTTTTTCATCTGTCACCTTCTGGAAGCCTGCCGCTGTTGGAAGAATTGAATATAAGTGAATGTGGTAACTTGAAAAACATATTTACATCTGAAAGAGTGGATGGCGCGATTGAAGTTAATGGTGATAATGATAATAACAAGAGCTGCAACTCATTGTTTCCAAAGCTCAAAGTTGTCAAAATAGATCATTGTGATAAGTTGACTTACATATTTGAGCAAGAAGTCAAACTGGATTCACTAATAGAATTGGAGCTAAAATGTGTGTCAAATTTTATCGGCATATTTCCAGAATCTTATCATTCCATTGAAAGGTCATCTAATTCCATTTCCAAGCCACAAACAGAATTGCAGGTGAAGCCATTGAAATCCAATATTATATTCTCTTGGAGTCATATATGTTGTTATAGATACAAGTTGAAGGGTGCCACAAGTACTAAAGTCCCATTGGTTAGTCAGGATCAGCCACAAGCCTGCTCAATCTCCACGGAAACAAGTTCATATTGTCCTAACATATGGGAACGTGCTCAATGTCTTTCAAGACTATCTCATATCATTTGCAATATTAAAGTGATCAAACTGGAGCGACTTTCAAAGATAAAATCAGTGTTTATGTTGTCTATTGCACCAAAAATGTTGTCGTTGGAGAGCTTGACTATTATTGGTTGTGATGAATTGGAGCACATAGTAGTAGACATTGAAGATGGGAGTGGTGGAAATGAATTGGGCAATGTCTTCCCAAAATTAAAAGAGCTCAATGTTGAAAAATGCGGGAAATTGAAATACATATTTGGGCACATTAATGCTAGTGATGATGATCATGATCAAAACAACAATGAAATTCAACTTCATCTTCCAGCATTGAAAACTCTCAAGCTTGTTGATCTCAAAAGTTTAATCGGCATGTCGCCCAAACAATATCACATAACATTTTCACCTTTGAAAGAAGTTGAACTCAAAGAATGCTCTCAGGTTGATGTTAAATCTATTGGTGATTTTACCTTCCTTGCTTCAATTTCAAGATATCAGGACAGTACAACTATCAAGGAATTCAGTGGGAACATGGAACATCTTCTAGCTTTGGAAATGCTCAATGTATCTAAATCCAATGTAGAAAGTATAGTATGTCTCAGTGAAGAAAGTGAGCGGCAGATAAACTTGGGGTTGCAAAACATTATTTTGCATAATCTACCTATGATGATATATCTTTTTATGGGTCCTAAAAATGCATTTGCCCTCAAAAACCTTAAAAGTATAACCATCTCTCAATGTGAAAAATTGGAAATAGTTTTCTCCACCTCTATTCTAAGATGCCTATCACAGTTGTCTCATCTAAGAATACAAGAATGCAATGAGTTGAAGCATATCATTGAAGATGATGATGATATTGAGAATCAAGGAATGTCAAAGACATACTTCCCAGTGCTAAAAACCCTTGCAGTAGCAATGTGCAATAAGTTGAAAAGTGTCTTTCCGATCTCCATGAAGAACGAGCTTCCTCCTGAGTTAAAGGTTATGATGATAGGTGAAGCACATGAACTGAAAGAAATATTCAAAAGTGTAGGTGGTGATAATCAGAAAGTTGAGATTCCAAATCTGAAAGCTGTAGTATTTGTCAACCTACCAAGCTTGTGCCATGTCCAGGGAATTCAATTTCAGGCCGTAGAAATCCATTACATAAAGAATTGTAAAGAATTGTCTCCGACATCGTTAACATCTAGCAGAAATTTCGAAGCGTTTGGAATAGCTGGCATAGATCTTGGTGTGCGTGTGAATCTGAATGGTCTATTTAGAAAATTAGAATACATGATGGCAACATCTTCACAGAAAGAAATGAACCGAACACCAGAGACAAAGCATGAATTTATTGAAAATGTTCCTGATTTAGAGATACCATCAGTGACAACATTACCAACAAATTCCCAAGAGTTGACAAGTGAAGAATCAACAAGTCAACACTTACTTGGAGAAATTGATACTACCATCAAACTTTCTCAAGGAGACTTTTTGGAAGGTTCTATGTCTACCATTTCAGAAACAAGGAATGTGCCACCTATACATTTAGTTGATCTTAAACAAAAGGGTATTCAGGTAAGCGTTGAAGAAGGAACTGCATCAACTAGTTATGCCAACACAATAACATCATCAACTCATTTAGAATCAGAATATGGTGATGGCCAAATAGGCATACCTTTTCCAGTTTCAACTACAGATTGTCTTAACATCGCAGATGTTAATCTTGGAGACTCACACGAAACAACTCAAACTAACAATCAAGTTTCTCTAAATGATAATGCTGCCATGCAAGTAAGCTCAACTATTCAACAACAGTTTCATAAAGATGACGGAATAATAGTTTCTGGTTTAGAGATGCCATCAGCAGTATATTCACCAACAAACTCACAATTGGAGGGTTCTACATCAGAAAAAACAACAGAAGCAGCAACCATGTCTACTACTTCAGAACTAAAGAATGAGCCAGATGGTATGAAGATAAGTGTGGAAGATGGAACTACATCAGCTAATGCCAAGACAATAACATCATCAACTCATTCAAAATCAGTGAGTTCATCATCAGGTTTATCAACTACTTCTAAGTCGGAAACATCTTCACCGGAAGATGGAGATGGCAAAATATCCATACCCTCTTTTTCAACTGTCAATACAAAGCCTCCTGCCACCAAATATGTTGATATTGGAGACTCACAGGAAATTATTGCAATGGAAGACATTAACATGCTGATCGAAGAAGACCCACTTCTTGCACTTCTTGCACTTGAGAAGCTTCTTACAGGACAAGTCTCGATTTCCTCCGCTCGAGTTTTACTTCAAGAATTGAAGACTTTGATGGACTCATCATCAGACCTTGACCATCTTGTATCTAACCAAGAGTCTATTACAAAATTGAATTCTCTTTTTCATCGATTGAATCAATATCAAGGGATGTTAACTTCTGACTTGAAGGACTTTGTTGAGAAGGTTCAGAACTTCTTCAATGAAAACATTATCAGACACGCCACTGCTCAACAAGTACTCAAGAAGCACAACCAACTTCTTGATTCGAAAACTGATCTCATGAACAAGCTTTGGAGTGTAAAGAGTACACAAACCCACATTGATAGTGAAACTTCAACTACCAATGCTCAGATACATGAGCTCTCTTTACAAATTGATGAACTGACAAAAAGGTTGGCAGATCTTGAGAATCAAAGAGATAGTTTGAAGTCGGTGGCAAACAAATGTGATGTTCAGAAGATGAAGTTGAAGGCCGAATGCACAGAATTGGTCCAACAAAGTAAAAAATTCTTTTCTGCACTTGCTTCATCAGAGGTTGACCTAAGAGAAGCTGAGCATGCGAGGGATTTGGCAAAAGAAGGCTTTGCAAATTTAAAATCATCATTTCCTAGACTTTAG 5892 0.3647 MASFLTDLVKPYVEKLINGAITESSYICCFTCIAKDFEDEKTRFEVERTTFNQRVDVATRSGENVQANALLWKKEAEELIQEDTKTKQNIFFGFCCDCIWRYRRGKELANKKEQIKILIKTGKELAIGLPAHLPDVERYSSQHYIPFESRESKYKELLDALNDDKNYIVGLQGMGGTGKTTLAKEVGKELKRSNQFTHVIDTTVSFSPDIKKIQDDIAGPLGLNFDDCNESDRPKKLWRRLTNGEKILLILDDVWGDIDFNDIGIPHIDYHKGCRVFVTTRYLWVCNRLECSKTIQLDLLSEEDTWIMFQRHAGLSEISTKNLLDKGRKIANECKRLPVAIAAIASSLKGEQRQEKWDVALNSLQKHMAIGGVESVDNDLVDTYKCLKFSYDYLKDEKAKKLFLLCSVFPEDEEIPTYILTRLGIGVGLFEGGYDKYNNARNLLVVAKNKLLDSCLLLKTDEGDVKMHDLVREVAQWIANKEILAVNFSNKNQKSLVGRNNIKYLLFDGSPNDLCPPMFDGSKLKILILSMVTGCFVDSFFENIAGLRVLILIYRGEEITISLPRSIRSLTNIRSLLVKCANLGDISVLGNLQSLQTLDLIFCMIDELPQEISNLKGLRLLNLELCSIENNNPFEVIQRCPSLEELYFWSSFNDFCQEITLPTSTLERYHLTDTISDSSGSKCVSLYNDYLSEETFKHVMQTAEHLKLKRIKKGWRNIMPEIVPIDQGMNDLIKLHLNDDSQLQFLVDTKHIDSQVPNVFSKLVVLKLNEMENLEELCNGPISFDSMNNLEKLTIKSCGNLRSLFKGNVNLCNLKTVKIEACPTLVSVFHLSPSGSLPLLEELNISECGNLKNIFTSERVDGAIEVNGDNDNNKSCNSLFPKLKVVKIDHCDKLTYIFEQEVKLDSLIELELKCVSNFIGIFPESYHSIERSSNSISKPQTELQVKPLKSNIIFSWSHICCYRYKLKGATSTKVPLVSQDQPQACSISTETSSYCPNIWERAQCLSRLSHIICNIKVIKLERLSKIKSVFMLSIAPKMLSLESLTIIGCDELEHIVVDIEDGSGGNELGNVFPKLKELNVEKCGKLKYIFGHINASDDDHDQNNNEIQLHLPALKTLKLVDLKSLIGMSPKQYHITFSPLKEVELKECSQVDVKSIGDFTFLASISRYQDSTTIKEFSGNMEHLLALEMLNVSKSNVESIVCLSEESERQINLGLQNIILHNLPMMIYLFMGPKNAFALKNLKSITISQCEKLEIVFSTSILRCLSQLSHLRIQECNELKHIIEDDDDIENQGMSKTYFPVLKTLAVAMCNKLKSVFPISMKNELPPELKVMMIGEAHELKEIFKSVGGDNQKVEIPNLKAVVFVNLPSLCHVQGIQFQAVEIHYIKNCKELSPTSLTSSRNFEAFGIAGIDLGVRVNLNGLFRKLEYMMATSSQKEMNRTPETKHEFIENVPDLEIPSVTTLPTNSQELTSEESTSQHLLGEIDTTIKLSQGDFLEGSMSTISETRNVPPIHLVDLKQKGIQVSVEEGTASTSYANTITSSTHLESEYGDGQIGIPFPVSTTDCLNIADVNLGDSHETTQTNNQVSLNDNAAMQVSSTIQQQFHKDDGIIVSGLEMPSAVYSPTNSQLEGSTSEKTTEAATMSTTSELKNEPDGMKISVEDGTTSANAKTITSSTHSKSVSSSSGLSTTSKSETSSPEDGDGKISIPSFSTVNTKPPATKYVDIGDSQEIIAMEDINMLIEEDPLLALLALEKLLTGQVSISSARVLLQELKTLMDSSSDLDHLVSNQESITKLNSLFHRLNQYQGMLTSDLKDFVEKVQNFFNENIIRHATAQQVLKKHNQLLDSKTDLMNKLWSVKSTQTHIDSETSTTNAQIHELSLQIDELTKRLADLENQRDSLKSVANKCDVQKMKLKAECTELVQQSKKFFSALASSEVDLREAEHARDLAKEGFANLKSSFPRL* 1964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3613 1963 Gene3D Ribonuclease Inhibitor 832 949 IPR032675 -
Tpr3g3613 1963 Gene3D Ribonuclease Inhibitor 1103 1355 IPR032675 -
Tpr3g3613 1963 Gene3D Ribonuclease Inhibitor 669 831 IPR032675 -
Tpr3g3613 1963 PANTHER - 60 919 - -
Tpr3g3613 1963 PANTHER - 1239 1367 - -
Tpr3g3613 1963 PANTHER - 1001 1126 - -
Tpr3g3613 1963 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 406 IPR027417 -
Tpr3g3613 1963 PRINTS Disease resistance protein signature 168 183 - -
Tpr3g3613 1963 PRINTS Disease resistance protein signature 241 255 - -
Tpr3g3613 1963 PRINTS Disease resistance protein signature 334 348 - -
Tpr3g3613 1963 PRINTS Disease resistance protein signature 835 851 - -
Tpr3g3613 1963 MobiDBLite consensus disorder prediction 1622 1711 - -
Tpr3g3613 1963 Pfam NB-ARC domain 156 392 IPR002182 GO:0043531
Tpr3g3613 1963 Gene3D - 390 473 IPR036388 -
Tpr3g3613 1963 MobiDBLite consensus disorder prediction 1661 1711 - -
Tpr3g3613 1963 MobiDBLite consensus disorder prediction 1622 1652 - -
Tpr3g3613 1963 Coils Coil 1876 1910 - -
Tpr3g3613 1963 Gene3D - 299 389 IPR042197 -
Tpr3g3613 1963 Gene3D Ribonuclease Inhibitor 474 668 IPR032675 -
Tpr3g3613 1963 SUPERFAMILY L domain-like 983 1394 - -
Tpr3g3613 1963 SUPERFAMILY L domain-like 466 914 - -
Tpr3g3613 1963 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1001 1126 - -
Tpr3g3613 1963 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 1239 1367 - -
Tpr3g3613 1963 PANTHER AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN, PUTATIVE-RELATED 60 919 - -
Tpr3g3613 1963 CDD AAA 154 280 - -
Tpr3g3613 1963 Gene3D - 132 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3613 Tpr-Chr3 40108320 40121759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3613 169 513 WRKY Transcription Factor Family AT5G45050 24.501 1.37e-09 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3613 - - mtr:MTR_3g062420 1666.36