Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3606 ATGGAAAAACAAATGCAAGATCCACCATCAAACTCAAACTCTAATCCCAATGTCACATCATCATCAACAACTCCTCCTTCTTCCAACATCTTCATCCGCGGCACCGTTAACGGTGTTTCCACCACCGCATCTGTCGCCGTCGAATCCCACTCTCACCACCGTAGATCACACTCAGAGATCAACTACCGTCTTCCCGACGACATGATGGACCTCTCTCCTTCAGATCCATTGAACGGAGGAGGATCTTCCACAGCTAGCTTTGAAGAAATCGGATCCGAAGATGACTTGTTCTTCACCTACATTGACGTCGACAAGCTCGGAGGTGTTACGAATGGTTTGAATCAGAACGGTTATGGTAACGGTAACGGTAACGGTGTTGGAACGAGTGGTAATAACGACGGTGAGAAGAGTCCGAATGATGATGCTACTACGCCGAGAACGAGACATAGACATAGTTGCTCCGTTGATGGTTCAACGTCGACGAGTATGTTTGGAGAGATCATGGATGCCAAGAAAGCTATGCCTCCTGATAAACTCGCTGAGCTTTGGACTATTGATCCAAAACGTGCTAAGAGAATACTTGCAAACCGGCAATCTGCTGCACGTTCAAAAGAGAGAAAGGCTCGCTATATACAAGAACTTGAGCGCAAGGTTCAGACCCTTCAAACGGAAGCCACAACTCTCTCTGCTCAATTGACACTATATCAGAGGGACACAGGTGGTCTGAGTAACGAAAATACTGAGCTTAAGATCCGTCTGCAAGCCATGGAACAACAGGCACACCTTCGAGATGCTCTTAACGATGCGTTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACCGGGGAGGCAATGAATCCCTCTGAATCTTTTAATATGGGAATGCACCAGATGCAATTTGGAGGGTCAAATTTCTTTTCAATTCCGCAACATTCAGGTCCTTTAGGTCACCCCCAGGACATACAATTTCCTCAATTTGGTCACTCCCCATCTAACATGGCGAATCATCAGATGCGACAAACCAATTCTCACCAAATGTCGGACATGTTGCAAAATGATCAGCTCGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCAACCCTCGTGAAGTCTGAAGGTCCGTCAATATCTGCAAGTGAGAGTAGCACTACATTTTGA 1164 0.4622 MEKQMQDPPSNSNSNPNVTSSSTTPPSSNIFIRGTVNGVSTTASVAVESHSHHRRSHSEINYRLPDDMMDLSPSDPLNGGGSSTASFEEIGSEDDLFFTYIDVDKLGGVTNGLNQNGYGNGNGNGVGTSGNNDGEKSPNDDATTPRTRHRHSCSVDGSTSTSMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTGGLSNENTELKIRLQAMEQQAHLRDALNDALMKEVERLKIATGEAMNPSESFNMGMHQMQFGGSNFFSIPQHSGPLGHPQDIQFPQFGHSPSNMANHQMRQTNSHQMSDMLQNDQLGRLQGLDISSKGSTLVKSEGPSISASESSTTF* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3606 387 SUPERFAMILY Leucine zipper domain 188 238 IPR046347 GO:0003700|GO:0006355
Tpr3g3606 387 MobiDBLite consensus disorder prediction 1 30 - -
Tpr3g3606 387 CDD bZIP_plant_RF2 189 238 IPR044759 GO:0003700|GO:0006355
Tpr3g3606 387 Pfam bZIP transcription factor 188 235 IPR004827 GO:0003700|GO:0006355
Tpr3g3606 387 PANTHER BZIP TRANSCRIPTION FACTOR 1 384 - -
Tpr3g3606 387 Gene3D - 188 237 - -
Tpr3g3606 387 MobiDBLite consensus disorder prediction 139 153 - -
Tpr3g3606 387 MobiDBLite consensus disorder prediction 367 387 - -
Tpr3g3606 387 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Tpr3g3606 387 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Tpr3g3606 387 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 384 - -
Tpr3g3606 387 Coils Coil 204 231 - -
Tpr3g3606 387 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3606 Tpr-Chr3 39978587 39981437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3606 5 387 bZIP Transcription Factor Family AT2G40620 47.433 1.52e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g3606 bZIP_1 1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3606 - - gmx:100775607 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3606 3 39978587 39981437 Tpr3g3606 3 39978587 39981437 ECH
Tpr3g3606 3 39978587 39981437 Tpr4g2870 4 32531028 32534015 PCT