Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3605 ATGGTTAAGGAAATACCTTTCATTGTTTTATGTGTACTCACTTTGAGTTTAGCTTTACTCCTCAAAAAATTTCTCTCAAAAAGTCAAACAAAAGGATCTTTGGGGTACCCTATTATTGGAGAGACATTTGGTTTTATTAAAGCACTGAGGAAGGACAAAGGCTCTGAGTGGATAGAAGAAAGAGTATCCAAGTATGGTCCTGTCTTTAAAACATCCATAATGGGTTCTCCAACAGTAGTTATTATTGGACAACAAGGAAACAAATTTGTTCTTAGTTCCTCAGATGATGTTATTTCTGCAAAGAAACCTCCTACCTTTCAAAAGATTTTAGGAAAACAAAGCCTTTTTGAACTTACTGGATCAAGACATAGGTTGGTGAAGGGGGAAATGCTGAAATTCTTAAAACCTGAATGCCTTCAAAACTATGTGAAAAAGATGGATGAATTAGTGAACACAATATTACTAAAAGAATTGCAAGAGAACAAAACAATTGGAGTTGTAAGGTTGATGAAGAAACTTTCCTATGATATGGCATGCAATATATTATTTGACATTAAAGATGAACAAACAAAGGAAGCTATGTTTGAAGATTTTATCACAGCATTTAAAGCACTTCATTCTCTTCCAATAACTTTCCCTGGTACCTCATTTTGGAGAGGCCAAAAGGCTAGAGCAAGAATTGTGGAAAAGATAATTCCTATTATGAACAAAAGAAGAGAGGAATTGTCAAAAGGAATTCTAAGCTCTACTAATGATATGCTTTCTTGCCTTCTTGCAATAAGAGATGAAAATGGTCAACCTCTAGAAGATGACTTAATTACTGACAATTTTATTTTTCTATTTATGGCAAGTTATGACACTTCTGCTACTCTTATAACCATGATGATATGGAAGTTATCTAGAGATCCAGATGTTTACAATAAAGTTTTAGAAGAACAAATGGAAATCTTAAAGCAAAGGGAAGGAATCGAAGACAGATTAACATGGAGAGAGATTCAAAAGATGAAATACACATGGAGAGTTGCTCAAGAATTGATGAGGATGATCCCACCTGCATTTGGTGGATTTAGGAAAGCACTTAAAGATACTAGTTACGAAGGATACGACATACCAAAAGGGTGGACGGTATATTGGGCATCATGTGGAACACATATGGACAAAGATATATTTGAGAATCCACAAGAGTTTGATCCATCTCGTTTTGAAAATCAAGCTAAGCCAATCCCACCATTTTCTTACCTTCCATTTGGTGCAGGGGTTCATAATTGCATAGGGAATGAGTTTGCTAGGGTTGAGACCTTAACTACCATTCACAATTTTGTGAAGATGTATGAATGGTCTCAATTAAATCCAGAGGAAACTATTACTCGTCAACCAATGCCGTATCCATCCTTGGGTCTCCCAATTAAGATCAAAAAAAGATGTAGTAATATGTCTTAA 1440 0.3514 MVKEIPFIVLCVLTLSLALLLKKFLSKSQTKGSLGYPIIGETFGFIKALRKDKGSEWIEERVSKYGPVFKTSIMGSPTVVIIGQQGNKFVLSSSDDVISAKKPPTFQKILGKQSLFELTGSRHRLVKGEMLKFLKPECLQNYVKKMDELVNTILLKELQENKTIGVVRLMKKLSYDMACNILFDIKDEQTKEAMFEDFITAFKALHSLPITFPGTSFWRGQKARARIVEKIIPIMNKRREELSKGILSSTNDMLSCLLAIRDENGQPLEDDLITDNFIFLFMASYDTSATLITMMIWKLSRDPDVYNKVLEEQMEILKQREGIEDRLTWREIQKMKYTWRVAQELMRMIPPAFGGFRKALKDTSYEGYDIPKGWTVYWASCGTHMDKDIFENPQEFDPSRFENQAKPIPPFSYLPFGAGVHNCIGNEFARVETLTTIHNFVKMYEWSQLNPEETITRQPMPYPSLGLPIKIKKRCSNMS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3605 479 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Tpr3g3605 479 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 Gene3D Cytochrome P450 23 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 Pfam Cytochrome P450 36 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3605 479 PANTHER CYTOCHROME P450 26 6 472 - -
Tpr3g3605 479 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 472 - -
Tpr3g3605 479 SUPERFAMILY Cytochrome P450 26 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3605 Tpr-Chr3 39969765 39975522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3605 32 449 Cytochrome P450 AT4G19230 33.493 2.38e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3605 - - gmx:100790209 756.903