Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3602 ATGAGTTACACTCCTACATTCCTCTTCCTACTTCCCCTATCCTTTTGGCATCTTTTCCTTGTAATGTTTTTTGGCTTTATGGTAATCAAAATCATAAGACACATCTTAATTGCAAACACTATTAATAAAGCCAAACTTCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTTCCTGAAATGCTAGCAAACAAACCTGCAACTAGGTGGATACACAAAGTGATGGAAGAATTGAACACCGAAATAGCATGTATCCGTCTAGGAAATGTCCATGTTATCCCCGTTACTTGTCCCATCATTGCCCTTGAATTCATTAGAAAACATGATGCTGCTTTTGCATCAAGACCAATATCAATTTCCACTGATATCATAAGCAAAGGTTTCTTGACAACAGCTGTTACACCCTTTGGGGAACAATGGAAAAAAATGAAGAAAATATTTGTTAATGAATTGTTCTCCCCCCACAAACATCAATGGCTCGCAGACAAAAGGAACGAAGAAGCTGATAATCTCATGTTTTATGTCTACAACAAATGCAAAATTGCGGATGATGATGATGGTCTTGTGAATGTTCGTATTGTTGCACAACATTATTGTTGTAATTTGATGAGGAAATTGTTTTTTAATACAAGATACTTTGGACAAGGTAGGAATGATGGAGGTCCTGGTTTTGAGGAAGTGGAATATGTAGATGCCATGCTCACATTGCTTAGGTATGTTTTTGCCTTTTGTGTTTCTGATTACATGCCATTGTTGAGGGGACTTGACATTGATGGTCATGAGAGAAAGGTGAAAGATGCTATGAGTATTGTGAACAAGTATAATGATCCAATCATTGAAAGGAGAATTGAAAAATGGAAAGATGGATCAAAGACTAGTGCTGCTGATGCAGAGGACTTGCTTGATATTTTAATCTCTCTCAAAGATGCCAACAACAAACCATTATTGACATCAGAGGAAATCAAGGCTCAAACTCTAGAACTTTTTCTGGGAGGAGTGGATAATCCATCATATGCAGCTGAATTTGCAATAGCAGAAATGATAAATCAACCAGATTTACTTCAACGAGCCACCGAAGAATTGGACAGTGTGGTAGGAAAAGAAAGACTACTCCAAGAATCAGATATTCCAAACCTCAACTATGTGAAAGCGTGTGCAAGAGAAGCTTTTCGTCTTCATCCCATTACAATTTTTAATCCTCCCCATGTTGCTATGGACAACATAAAGGTTGGTAATTACATGATCCCAAAAGGTAGCCATGTACTTCTAAGCAAGCAAGGACTCGGTCGAAATCCAAAAATTTGGAATGAACCTTACAAGTTTAAACCAGAACGACATCTAAAAAATGATGGGTCTATGGTTGTTTTGGCGGAACCAGATTTAAAGTTCATATCATTTAGTACCGGAAGGCGTGGTTGTCCTGGAAATGTGCTTGGAACCACAATGACAATAATGTTATTGGGTAGGTTGCTCCATGGCTTCAATTGGAGTGGACCTCCTAATGTATCAACCATTGATCTTCTCAAGTATTCTAATGGTGATAGATACCTTGGAGGGCCACTTGTGGCAATAGCAAAGCCAAGATTGGCAGTCGAATTGTATCATCCATAA 1614 0.3848 MSYTPTFLFLLPLSFWHLFLVMFFGFMVIKIIRHILIANTINKAKLPPGPKPWPIVGNLPEMLANKPATRWIHKVMEELNTEIACIRLGNVHVIPVTCPIIALEFIRKHDAAFASRPISISTDIISKGFLTTAVTPFGEQWKKMKKIFVNELFSPHKHQWLADKRNEEADNLMFYVYNKCKIADDDDGLVNVRIVAQHYCCNLMRKLFFNTRYFGQGRNDGGPGFEEVEYVDAMLTLLRYVFAFCVSDYMPLLRGLDIDGHERKVKDAMSIVNKYNDPIIERRIEKWKDGSKTSAADAEDLLDILISLKDANNKPLLTSEEIKAQTLELFLGGVDNPSYAAEFAIAEMINQPDLLQRATEELDSVVGKERLLQESDIPNLNYVKACAREAFRLHPITIFNPPHVAMDNIKVGNYMIPKGSHVLLSKQGLGRNPKIWNEPYKFKPERHLKNDGSMVVLAEPDLKFISFSTGRRGCPGNVLGTTMTIMLLGRLLHGFNWSGPPNVSTIDLLKYSNGDRYLGGPLVAIAKPRLAVELYHP* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3602 537 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Tpr3g3602 537 Pfam Cytochrome P450 47 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 Gene3D Cytochrome P450 35 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3602 537 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 535 - -
Tpr3g3602 537 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 15 535 - -
Tpr3g3602 537 SUPERFAMILY Cytochrome P450 47 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3602 Tpr-Chr3 39943890 39946665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3602 14 535 Cytochrome P450 AT4G39950 50.474 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3602 - K14984 gmx:100809902 737.258