Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3600 ATGGTAATCAAAACCATAAGATACAAGAACCCTAACAAACCTAAACTTCCACCAGGTCCCAAACCATGGCCTATAGTTGGTAATCTCCCTGAAATGCTCGCAAACAAACCTACAACTAGGTGGATACATAAAATTATGGAAGAGTTTAACACCGAAATAGCATGTATCCGCCTAGGAAATGTCAATGTTATTCCTGTTACTTGTCCCGCCATTGCCCGTGAATTCTTGAGAAAACATGATGCGGATTTTGCATCAAGACCGATAAGTGTGGTCAGTGATATTATCTCCAATGGCTACATGACCTCAGTTTTTGCACCCTATGGCGAACAATGGAAAAAGATGAAGAAAATTATTGCTAAAGATTTGTTCTCTCCACGCAGACATCAATGGCTTCAAAACAAAAGAAACGAAGAAGCAGATAATCTTATGTTTTACGTGTACAACAAATGTAATAATGGCGGCCTTGTGAATGTTAGGATTGCTACTCAACATTATTGTGGCAATGTGTATAGGAAATCTTTTTTTAATAGAAGGTACTTTGGAAAAGGTATGAAGGATGGAGGGCCTGGTGTTGAGGAAGTTGAACATGTTGATGCTGTTTTCATATTGCTTAACTATGTTTTTGCTTTCTCTGTATCTGATTATATCCCATCGTTGAGGTTACTTGACTTAGATGGCCATAAGGGGGAGATAAAAAATGCAATGAGGATAATGAACAAGTATCATGATTCCATCATTGAAGAGAGAATTAACCAATGGAATGATGGAGCAAAGAATGTTGAAGAGGACTTGCTAGATGTTTTGATCTCCCTCAAAGATGACAATAATAAGCCATTATTGACAACAAAGGAAATCAAGGCACAAGTTATTGAATTGATGATGGCAATGGTAGACAATCCATCAAACGCGGTTGAATGGACATTGGCCGAAATGTTAAATCAACCCGAACTATTTCAAAAAGCCACTGAAGAATTGGACAATATAGTTGGAAAAGATAGATTGGTCCAAGAATCAGATATTCCTAAACTCAACTTCTTGAAGGCTTGCGCAAGAGAAGCTTTCCGCCTTCATCCCATTACAGATTTTATTCCTCCCCATGTCGCGATGAATGATACAATGGTTGGAAATTACTTGATACCAAAGGGTAGCCATGTATTGCTTGGAAGAAGTGGTCTTGGGAGAAACCCAAAAGTTTGGAGCGAACCATACAAATTCAAACCAGAACGTCATCTCAAGAACGACGGGTCTGATATATCATTGAGAGAGCCAGATTTAAAGTTCATATCCTTTAGTACCGGAAGGCGCGGTTGTCCAGGTGTCATGCTTGGCTCCACAATGACTATATTGCTATTAGCTAGGTTACTCCATGGATTCACTTGGAGTGCGCCTTCTGATATATCAAGAATTAATTGCGTCGACTCCAATAGTGTTCTGTTTCTTGATGCGCCATTGACGGTTGTAGCAAAGCCACGATTAGCAGTGGAATTGTTTAATAAGTTTTCAAGTAAATGA 1512 0.3909 MVIKTIRYKNPNKPKLPPGPKPWPIVGNLPEMLANKPTTRWIHKIMEEFNTEIACIRLGNVNVIPVTCPAIAREFLRKHDADFASRPISVVSDIISNGYMTSVFAPYGEQWKKMKKIIAKDLFSPRRHQWLQNKRNEEADNLMFYVYNKCNNGGLVNVRIATQHYCGNVYRKSFFNRRYFGKGMKDGGPGVEEVEHVDAVFILLNYVFAFSVSDYIPSLRLLDLDGHKGEIKNAMRIMNKYHDSIIEERINQWNDGAKNVEEDLLDVLISLKDDNNKPLLTTKEIKAQVIELMMAMVDNPSNAVEWTLAEMLNQPELFQKATEELDNIVGKDRLVQESDIPKLNFLKACAREAFRLHPITDFIPPHVAMNDTMVGNYLIPKGSHVLLGRSGLGRNPKVWSEPYKFKPERHLKNDGSDISLREPDLKFISFSTGRRGCPGVMLGSTMTILLLARLLHGFTWSAPSDISRINCVDSNSVLFLDAPLTVVAKPRLAVELFNKFSSK* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3600 503 Gene3D Cytochrome P450 9 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 Pfam Cytochrome P450 17 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 9 497 - -
Tpr3g3600 503 PRINTS E-class P450 group I signature 71 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 SUPERFAMILY Cytochrome P450 11 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g3600 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Tpr3g3600 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3600 Tpr-Chr3 39883092 39888798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3600 10 497 Cytochrome P450 AT4G39950 54.806 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3600 - K12153 gmx:100809902 736.873